RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 COX7A1P24310 79 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 DUSP1P28562 367 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 BMXP51813 675 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 UBE2E1P51965 193 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 SMN1Q16637 294 aaKnown RBP14.45□□□□□ -0.1
PNKP-230ENST00000638016 FDX2Q6P4F2 183 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 C1orf122Q6ZSJ8 110 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 TCF23Q7RTU1 214 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 RHOXF1Q8NHV9 184 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 WFDC12Q8WWY7 111 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 DYRK2Q92630 601 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 FAM118AQ9NWS6 357 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 WNK1Q9H4A3 2382 aa14.45□□□□□ -0.1
PNKP-230ENST00000638016 NDUFA7O95182 113 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 CLIC3O95833 236 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 ZNF20P17024 532 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 ATF1P18846 271 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 AZGP1P25311 298 aaKnown RBP14.44□□□□□ -0.1
PNKP-230ENST00000638016 ALKBH1Q13686 389 aaKnown RBP14.44□□□□□ -0.1
PNKP-230ENST00000638016 BLMHQ13867 455 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 TMEM244Q5VVB8 128 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 NCR3LG1Q68D85 454 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 CRIP3Q6Q6R5 217 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 TPRX1Q8N7U7 411 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 OR52I1Q8NGK6 324 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 OR5D18Q8NGL1 313 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 OR4F5Q8NH21 305 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 EMG1Q92979 244 aaKnown RBP14.44□□□□□ -0.1
PNKP-230ENST00000638016 CHST6Q9GZX3 395 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 MMP24Q9Y5R2 645 aa14.44□□□□□ -0.1
PNKP-230ENST00000638016 CMYA5Q8N3K9 4069 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 IGKV1-12A0A0C4DH73 117 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 POM121CA8CG34 1229 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 K7N7A8 449 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 PAHP00439 452 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 SERPINA3P01011 423 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 IGKV1D-12P01611 117 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 ISG15P05161 165 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 RBP2P50120 134 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 DLX6P56179 175 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 MTCP1P56278 107 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 EDDM3BP56851 147 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 GALEQ14376 348 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 EDDM3AQ14507 147 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 CNN3Q15417 329 aaKnown RBP14.43□□□□□ -0.1
PNKP-230ENST00000638016 LRRC36Q1X8D7 754 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 OLFML2AQ68BL7 652 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 Q6ZSV7 163 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 EGFL6Q8IUX8 553 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 CCDC54Q8NEL0 328 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 OR52N4Q8NGI2 321 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 OR5D13Q8NGL4 314 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 OR13C3Q8NGS6 347 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 OR13C9Q8NGT0 318 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 PP6455Q8WZ26 134 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 C10orf35Q96D05 121 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 DPAGT1Q9H3H5 408 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 ERVK13-1Q9NX77 482 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 VPREB3Q9UKI3 123 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 PKD1L1Q8TDX9 2849 aa14.43□□□□□ -0.1
PNKP-230ENST00000638016 WBP4O75554 376 aaKnown RBP14.42□□□□□ -0.1
PNKP-230ENST00000638016 HAND1O96004 215 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 PRR31Q5SQ13 230 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 XAF1Q6GPH4 301 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 C17orf107Q6ZR85 190 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 UTS2BQ765I0 119 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 KCTD20Q7Z5Y7 419 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 LHFPL4Q7Z7J7 247 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 ZNF676Q8N7Q3 588 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 LINC01006Q8NI28 216 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 OPALINQ96PE5 141 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 PDCD1LG2Q9BQ51 273 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 BEX1Q9HBH7 125 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 HHLA2Q9UM44 414 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 CAB39Q9Y376 341 aaPredicted RBP14.42□□□□□ -0.1
PNKP-230ENST00000638016 SF3B6Q9Y3B4 125 aaKnown RBP14.42□□□□□ -0.1
PNKP-230ENST00000638016 KIAA2026Q5HYC2 2103 aa14.42□□□□□ -0.1
PNKP-230ENST00000638016 CLPSL1A2RUU4 121 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 SNTNA6NMZ2 147 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 H3BUX3 64 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 PSPNO60542 156 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 ZFPL1O95159 310 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 CHRM2P08172 466 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 PRKACAP17612 351 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 CCR9P51686 369 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 GTF2A1P52655 376 aaPredicted RBP14.41□□□□□ -0.1
PNKP-230ENST00000638016 ATP1B3P54709 279 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 ACTA2P62736 377 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 ACTG2P63267 376 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 ACSM1Q08AH1 577 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 LY6EQ16553 131 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 LDLRAD2Q5SZI1 272 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 LPCAT4Q643R3 524 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 DNAAF1Q8NEP3 725 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 OR4S1Q8NGB4 309 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 CNIH3Q8TBE1 160 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 NKX3-1Q99801 234 aaPredicted RBP14.41□□□□□ -0.1
PNKP-230ENST00000638016 FAM234AQ9H0X4 552 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 SLITRK2Q9H156 845 aa14.41□□□□□ -0.1
PNKP-230ENST00000638016 TRBV2A0A0J9YWF9 115 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms