RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 DNAH3Q8TD57 4116 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 IGKV1-27A0A075B6S5 117 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 A0A1W2PQL4 384 aaPredicted RBP14.91□□□□□ -0.02
CLN6-220ENST00000637450 METTL15A6NJ78 407 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 SYT7O43581 403 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 OR2T7P0C7T2 308 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 FUT6P51993 359 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 PLA1AQ53H76 456 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 LDLRAD2Q5SZI1 272 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 KPRPQ5T749 579 aaPredicted RBP14.91□□□□□ -0.02
CLN6-220ENST00000637450 SAMD5Q5TGI4 173 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 ZNF626Q68DY1 528 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 FOXRED1Q96CU9 486 aaPredicted RBP14.91□□□□□ -0.02
CLN6-220ENST00000637450 GABARAPL1Q9H0R8 117 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 PLEKHA1Q9HB21 404 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 SERTAD4Q9NUC0 356 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 TCF19Q9Y242 345 aa14.91□□□□□ -0.02
CLN6-220ENST00000637450 MEX3AA1L020 520 aaKnown RBP14.9□□□□□ -0.02
CLN6-220ENST00000637450 A6NDX4 124 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 SULT1C4O75897 302 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 IGHV1-8P0DP01 117 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 HTR1FP30939 366 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 EDDM3BP56851 147 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 FAM189A2Q15884 450 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 SSX2Q16385 188 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 GDPD3Q7L5L3 318 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 ZDHHC13Q8IUH4 622 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 EGFL6Q8IUX8 553 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 OR8H2Q8N162 312 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 CCDC54Q8NEL0 328 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 BCAS4Q8TDM0 211 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 SLAMF9Q96A28 289 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 SNX22Q96L94 193 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 CHST5Q9GZS9 411 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 SEBOXQ9HB31 216 aaPredicted RBP14.9□□□□□ -0.02
CLN6-220ENST00000637450 ABCB10Q9NRK6 738 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 ENOPH1Q9UHY7 261 aa14.9□□□□□ -0.02
CLN6-220ENST00000637450 TMEM82A0PJX8 343 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 H3BSH0 61 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 GATBO75879 557 aaKnown RBP14.89□□□□□ -0.03
CLN6-220ENST00000637450 INMTO95050 263 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 DYNLT3P51808 116 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 MEF2CQ06413 473 aaPredicted RBP14.89□□□□□ -0.03
CLN6-220ENST00000637450 HABP2Q14520 560 aaPredicted RBP14.89□□□□□ -0.03
CLN6-220ENST00000637450 CNN3Q15417 329 aaKnown RBP14.89□□□□□ -0.03
CLN6-220ENST00000637450 SLC25A26Q70HW3 274 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 TCF23Q7RTU1 214 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 RPS4Y2Q8TD47 263 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 ADI1Q9BV57 179 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 PITPNC1Q9UKF7 332 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 NOTCH3Q9UM47 2321 aa14.89□□□□□ -0.03
CLN6-220ENST00000637450 SERPINA3P01011 423 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 CD28P10747 220 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 FASP25445 335 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 POLR2IP36954 125 aaKnown RBP14.88□□□□□ -0.03
CLN6-220ENST00000637450 TMEM219Q86XT9 240 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 LYG1Q8N1E2 194 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 PRSS35Q8N3Z0 413 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 OR10H4Q8NGA5 316 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 WIPF2Q8TF74 440 aaPredicted RBP14.88□□□□□ -0.03
CLN6-220ENST00000637450 C10orf35Q96D05 121 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 BORCS8Q96FH0 119 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 ZNF714Q96N38 554 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 AP4S1Q9Y587 144 aa14.88□□□□□ -0.03
CLN6-220ENST00000637450 hADV38S2A0JD32 116 aa14.87□□□□□ -0.03
CLN6-220ENST00000637450 FBXO24O75426 580 aa14.87□□□□□ -0.03
CLN6-220ENST00000637450 APOL3O95236 402 aa14.87□□□□□ -0.03
CLN6-220ENST00000637450 OR12D2P58182 307 aa14.87□□□□□ -0.03
CLN6-220ENST00000637450 EMX1Q04741 257 aaPredicted RBP14.87□□□□□ -0.03
CLN6-220ENST00000637450 DYNC1I2Q13409 638 aaKnown RBP14.87□□□□□ -0.03
CLN6-220ENST00000637450 FBLN7Q53RD9 439 aa14.87□□□□□ -0.03
CLN6-220ENST00000637450 AMIGO2Q86SJ2 522 aa14.87□□□□□ -0.03
CLN6-220ENST00000637450 OR52N4Q8NGI2 321 aa14.87□□□□□ -0.03
CLN6-220ENST00000637450 CIB1Q99828 191 aa14.87□□□□□ -0.03
CLN6-220ENST00000637450 PRSS22Q9GZN4 317 aa14.87□□□□□ -0.03
CLN6-220ENST00000637450 LOC107986453A0A1B0GWG9 222 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 HAND1O96004 215 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 IGHA1P01876 353 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 PEX2P28328 305 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 ATP6V1E1P36543 226 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 ISL1P61371 349 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 ACTA2P62736 377 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 ACTG2P63267 376 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 ACTC1P68032 377 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 ACTA1P68133 377 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 BNIP1Q12981 228 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 TMED1Q13445 227 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 EDDM3AQ14507 147 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 NSUN5P1Q3KNT7 163 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 MINOS1Q5TGZ0 78 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 Q8IYB0 196 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 ENTHD1Q8IYW4 607 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 RDH10Q8IZV5 341 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 TPRX1Q8N7U7 411 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 DNAAF1Q8NEP3 725 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 OR8J1Q8NGP2 316 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 PP6455Q8WZ26 134 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 EMG1Q92979 244 aaKnown RBP14.86□□□□□ -0.03
CLN6-220ENST00000637450 RNF166Q96A37 237 aaPredicted RBP14.86□□□□□ -0.03
CLN6-220ENST00000637450 WNT10AQ9GZT5 417 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms