RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TMEM136Q6ZRR5 245 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 MEX3DQ86XN8 651 aaKnown RBP6.44□□□□□ -1.38
COLCA1-205ENST00000620864 OR5C1Q8NGR4 320 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 OR52N5Q8NH56 324 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 PPT2Q9UMR5 302 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 TRBV9A0A0B4J1U6 114 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 PMP22Q01453 160 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 MPV17LQ2QL34 196 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 LIPIQ6XZB0 460 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 OVCH2Q7RTZ1 564 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 WDFY1Q8IWB7 410 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 C5orf17Q8NAS9 161 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF511Q8NB15 262 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 OR10G4Q8NGN3 311 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 OR10G9Q8NGN4 311 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 OR10G7Q8NGN6 311 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 TM4SF18Q96CE8 201 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 JMJD8Q96S16 334 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 MAGT1Q9H0U3 335 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 SEPSECSQ9HD40 501 aaKnown RBP6.44□□□□□ -1.38
COLCA1-205ENST00000620864 TMEM38BQ9NVV0 291 aa6.44□□□□□ -1.38
COLCA1-205ENST00000620864 CACNA1BQ00975 2339 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 H0YGG7 62 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 PTGESO14684 152 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 GLRA1P23415 457 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 RGRP47804 291 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 PGGT1BP53609 377 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 CIRBPQ14011 172 aaKnown RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 TWIST1Q15672 202 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 ELAVL1Q15717 326 aaKnown RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 C6orf15Q6UXA7 325 aaPredicted RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 NHLRC1Q6VVB1 395 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 HTR3DQ70Z44 454 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 PARS2Q7L3T8 475 aaKnown RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 MARVELD3Q96A59 401 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 DOK1Q99704 481 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 SLAMF8Q9P0V8 285 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 COA3Q9Y2R0 106 aaPredicted RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 UBR2Q8IWV8 1755 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 A0A1W2PPC4 97 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 IGHA1P01876 353 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 IGHA2P01877 340 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 DDTP30046 118 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 NPBWR2P48146 333 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 CYB561P49447 251 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 CA10Q9NS85 328 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 TAAR2Q9P1P5 351 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 FBXO4Q9UKT5 387 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 AMMECR1Q9Y4X0 333 aaPredicted RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 ALS2Q96Q42 1657 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 A0A1B0GW15 77 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 C9orf170A2RU37 121 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 HRO43593 1189 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 NKAIN1Q4KMZ8 207 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 TEX30Q5JUR7 227 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 LURAP1LQ8IV03 231 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 VSTM2AQ8TAG5 236 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 PBOV1Q9GZY1 135 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 PRSS37A4D1T9 235 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 TYMSP04818 313 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 ATF1P18846 271 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 DCTDP32321 178 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 NAAAQ02083 359 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 DHRS2Q13268 280 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 HSF5Q4G112 596 aaPredicted RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 C1orf185Q5T7R7 199 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 OXGR1Q96P68 337 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 C1QTNF6Q9BXI9 259 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 DEFB127Q9H1M4 99 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 GPR84Q9NQS5 396 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 KIAA0100Q14667 2235 aaKnown RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 POLR2IP36954 125 aaKnown RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 DEGS2Q6QHC5 323 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 PTP4A1Q93096 173 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 RSRP1Q9BUV0 290 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF385DQ9H6B1 395 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 MARCH5Q9NX47 278 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 C19orf53Q9UNZ5 99 aaPredicted RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 ST3GAL6Q9Y274 331 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 MIA3Q5JRA6 1907 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 C11orf94C9JXX5 98 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 F5H697 171 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 TMEM189-UBE2V1I3L0A0 370 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 OR2J2O76002 312 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 GOSR1O95249 250 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 TSPAN13O95857 204 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 SLC25A1P53007 311 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 DLEU7Q6UYE1 221 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 OR52B4Q8NGK2 314 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 AUNIPQ9H7T9 357 aa6.43□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF346Q9UL40 294 aaKnown RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 SOX21Q9Y651 276 aaPredicted RBP6.43□□□□□ -1.38
COLCA1-205ENST00000620864 FBLL1A6NHQ2 334 aaKnown RBP6.42□□□□□ -1.38
COLCA1-205ENST00000620864 CXorf1O96002 111 aa6.42□□□□□ -1.38
COLCA1-205ENST00000620864 SLC35E4Q6ICL7 350 aa6.42□□□□□ -1.38
COLCA1-205ENST00000620864 TMEM108Q6UXF1 575 aa6.42□□□□□ -1.38
COLCA1-205ENST00000620864 LIAT1Q6ZQX7 453 aa6.42□□□□□ -1.38
COLCA1-205ENST00000620864 TUSC5Q8IXB3 177 aa6.42□□□□□ -1.38
COLCA1-205ENST00000620864 OR1N2Q8NGR9 330 aa6.42□□□□□ -1.38
COLCA1-205ENST00000620864 FGF14Q92915 247 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms