RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 RIBC2Q9H4K1 309 aa17.87■□□□□ 0.45
SRRT-218ENST00000620394 RANBP3Q9H6Z4 567 aaPredicted RBP17.87■□□□□ 0.45
SRRT-218ENST00000620394 MTCH1Q9NZJ7 389 aa17.87■□□□□ 0.45
SRRT-218ENST00000620394 RBP4P02753 201 aa17.86■□□□□ 0.45
SRRT-218ENST00000620394 BMXP51813 675 aa17.86■□□□□ 0.45
SRRT-218ENST00000620394 ODF4Q2M2E3 257 aa17.86■□□□□ 0.45
SRRT-218ENST00000620394 LIAT1Q6ZQX7 453 aa17.86■□□□□ 0.45
SRRT-218ENST00000620394 PPP1R35Q8TAP8 253 aa17.86■□□□□ 0.45
SRRT-218ENST00000620394 RFKQ969G6 155 aa17.86■□□□□ 0.45
SRRT-218ENST00000620394 CEP19Q96LK0 163 aa17.86■□□□□ 0.45
SRRT-218ENST00000620394 SEBOXQ9HB31 216 aaPredicted RBP17.86■□□□□ 0.45
SRRT-218ENST00000620394 RAB18Q9NP72 206 aa17.86■□□□□ 0.45
SRRT-218ENST00000620394 LOC107986453A0A1B0GWG9 222 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 FAM230AA0A1W2PPH8 454 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 MEGF11A6BM72 1044 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 FAM90A8PA6NJQ4 464 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 VGLL3A8MV65 326 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 F8VVB4 439 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 F8VWA3 439 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 UBCP0CG48 685 aaKnown RBP17.85■□□□□ 0.45
SRRT-218ENST00000620394 KIR3DL2P43630 455 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 FUT6P51993 359 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 EFNB2P52799 333 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 LOXL3P58215 753 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 COL10A1Q03692 680 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 ZNF85Q03923 595 aa17.85■□□□□ 0.45
SRRT-218ENST00000620394 ODF3BA8MYP8 253 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 CHRM2P08172 466 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 COX7A1P24310 79 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 KIR2DS4P43632 304 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 CDC42P60953 191 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 TCF23Q7RTU1 214 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 FAM220AQ7Z4H9 259 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 OR8H2Q8N162 312 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 ASCC1Q8N9N2 400 aaKnown RBP17.84■□□□□ 0.45
SRRT-218ENST00000620394 DNAAF1Q8NEP3 725 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 PIFOQ8TCI5 191 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 PP6455Q8WZ26 134 aa17.84■□□□□ 0.45
SRRT-218ENST00000620394 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.84■□□□□ 0.45
SRRT-218ENST00000620394 KMT2CQ8NEZ4 4911 aaKnown RBP17.83■□□□□ 0.45
SRRT-218ENST00000620394 SAC3D1A6NKF1 404 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 E9PQ18 207 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 H3BSH0 61 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 CHST1O43916 411 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 ZNF728P0DKX0 622 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 PIPP12273 146 aaPredicted RBP17.83■□□□□ 0.44
SRRT-218ENST00000620394 PAX6P26367 422 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 CNN3Q15417 329 aaKnown RBP17.83■□□□□ 0.44
SRRT-218ENST00000620394 LY6EQ16553 131 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 ZNF782Q6ZMW2 699 aaPredicted RBP17.83■□□□□ 0.44
SRRT-218ENST00000620394 Q8IYB0 196 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 OR4C13Q8NGP0 309 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 TRUB1Q8WWH5 349 aaKnown RBP17.83■□□□□ 0.44
SRRT-218ENST00000620394 CFHR4Q92496 578 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 SLAMF9Q96A28 289 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 BORCS8Q96FH0 119 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 NECAP2Q9NVZ3 263 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 GNG8Q9UK08 70 aa17.83■□□□□ 0.44
SRRT-218ENST00000620394 TBL2Q9Y4P3 447 aaKnown RBP17.83■□□□□ 0.44
SRRT-218ENST00000620394 J3QRE1 110 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 XPNPEP2O43895 674 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 ALPLP05186 524 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 ATP6V1E1P36543 226 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 LGALS4P56470 323 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 TP53I3Q53FA7 332 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 SLC25A30Q5SVS4 291 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 ZNF626Q68DY1 528 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 FDX2Q6P4F2 183 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 SLC25A26Q70HW3 274 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 OR11H6Q8NGC7 330 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 OR2G2Q8NGZ5 317 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 FOXRED1Q96CU9 486 aaPredicted RBP17.82■□□□□ 0.44
SRRT-218ENST00000620394 HRASLS5Q96KN8 279 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 ADI1Q9BV57 179 aa17.82■□□□□ 0.44
SRRT-218ENST00000620394 NBEAL2Q6ZNJ1 2754 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 TRBV2A0A0J9YWF9 115 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 TMEM82A0PJX8 343 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 CIB2O75838 187 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 SERPINA3P01011 423 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 ISG15P05161 165 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 ACTC1P68032 377 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 ACTA1P68133 377 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 ZNF91Q05481 1191 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 MEF2CQ06413 473 aaPredicted RBP17.81■□□□□ 0.44
SRRT-218ENST00000620394 UTS2BQ765I0 119 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 GDPD3Q7L5L3 318 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 LHFPL4Q7Z7J7 247 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 DYNAPQ8N1N2 210 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 ADAT3Q96EY9 351 aaPredicted RBP17.81■□□□□ 0.44
SRRT-218ENST00000620394 SNX22Q96L94 193 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 CDCA4Q9BXL8 241 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 NPFFR1Q9GZQ6 430 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 SIGLEC9Q9Y336 463 aa17.81■□□□□ 0.44
SRRT-218ENST00000620394 IGKV1-9A0A0C4DH69 117 aa17.8■□□□□ 0.44
SRRT-218ENST00000620394 IGHV1-8P0DP01 117 aa17.8■□□□□ 0.44
SRRT-218ENST00000620394 RBP2P50120 134 aa17.8■□□□□ 0.44
SRRT-218ENST00000620394 EDDM3BP56851 147 aa17.8■□□□□ 0.44
SRRT-218ENST00000620394 LDLRAD2Q5SZI1 272 aa17.8■□□□□ 0.44
SRRT-218ENST00000620394 TMEM244Q5VVB8 128 aa17.8■□□□□ 0.44
SRRT-218ENST00000620394 ENTHD1Q8IYW4 607 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms