RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322		Q8N402	240 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZDHHC22	Q8N966	263 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	GDPD1	Q8N9F7	314 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	C19orf18	Q8NEA5	215 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	DUSP18	Q8NEJ0	188 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR4N2	Q8NGD1	307 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CNOT9	Q92600	299 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMEM186	Q96B77	213 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF524	Q96C55	264 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMEM68	Q96MH6	324 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	SORCS2	Q96PQ0	1159 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	BABAM2	Q9NXR7	383 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	WDR45	Q9Y484	360 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	LINC00862	A6NCI5	91 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	OOSP1	A8MZH6	123 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	TIMM23	O14925	209 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	TCAP	O15273	167 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MRPL33	O75394	65 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	FARS2	O95363	451 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	DUS4L	O95620	317 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	TSPAN15	O95858	294 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CSTA	P01040	98 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	SLC2A2	P11168	524 aa	Predicted RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MTNR1B	P49286	362 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	RPS11	P62280	158 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	COL10A1	Q03692	680 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	SCN1B	Q07699	218 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	LRRC37A5P	Q49AS3	106 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	HSD17B12	Q53GQ0	312 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CD276	Q5ZPR3	534 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	TRIQK	Q629K1	86 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	DMKN	Q6E0U4	476 aa	Predicted RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF584	Q8IVC4	421 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR5R1	Q8NH85	324 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	GPR148	Q8TDV2	347 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMEM239	Q8WW34	195 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMED9	Q9BVK6	235 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	FAM234A	Q9H0X4	552 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR52D1	Q9H346	318 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	TXNIP	Q9H3M7	391 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MRPL22	Q9NWU5	206 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	LAMP5	Q9UJQ1	280 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MED12	Q93074	2177 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	KALRN	O60229	2985 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	SULT2B1	O00204	365 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	PAX4	O43316	350 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	RNF13	O43567	381 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	NGF	P01138	241 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	MB	P02144	154 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	HMGN1	P05114	100 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	S100A6	P06703	90 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	TFPI	P10646	304 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	PSMB10	P40306	273 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	GPR4	P46093	362 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	HOXA1	P49639	335 aa	Predicted RBP	4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	SUMO1	P63165	101 aa	Known RBP	4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	RUNX1T1	Q06455	604 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	C1D	Q13901	141 aa	Known RBP	4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	GK2	Q14410	553 aa	Predicted RBP	4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	RNF151	Q2KHN1	245 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	ARL9	Q6T311	187 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	TEPP	Q6URK8	271 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	LRRTM1	Q86UE6	522 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	NAA40	Q86UY6	237 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	STX12	Q86Y82	276 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	SERPINA12	Q8IW75	414 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	CIART	Q8N365	385 aa	Predicted RBP	4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF383	Q8NA42	475 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	CYB561A3	Q8NBI2	242 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	KCTD7	Q96MP8	289 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	SPATA25	Q9BR10	227 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	ISG20L2	Q9H9L3	353 aa	Known RBP	4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	MED29	Q9NX70	200 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	SSR3	Q9UNL2	185 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	DSCAM	O60469	2012 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	FXYD6-FXYD2	A0A087WZ82	144 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	IGHV2-70D	A0A0C4DH43	119 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322		A0A1B0GV50	99 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	GABRP	O00591	440 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	OGG1	O15527	345 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	DHFR	P00374	187 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	CD3G	P09693	182 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMEM11	P17152	192 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	SDC2	P34741	201 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	PRKAG1	P54619	331 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	RGS8	P57771	180 aa	Predicted RBP	4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	RAB35	Q15286	201 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	SLC36A2	Q495M3	483 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	CCNJ	Q5T5M9	372 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	UNQ9370/PRO34162	Q6UXP9	181 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	PUSL1	Q8N0Z8	303 aa	Known RBP	4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	BPIFC	Q8NFQ6	507 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	RXFP4	Q8TDU9	374 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	TTTY10	Q9BZA0	68 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	FXYD6	Q9H0Q3	95 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	SLC7A10	Q9NS82	523 aa		4.53	□□□□□ -1.68
CBWD3-215	ENST00000619322	PRSS50	Q9UI38	385 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms