RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 INMTO95050 263 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 BRI3O95415 125 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 IGLV1-40P01703 118 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SEMG1P04279 462 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 OR5H8P0DN80 308 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 PSKH1P11801 424 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 RHCEP18577 417 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 CNTFRP26992 372 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 GPR4P46093 362 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 GABRA2P47869 451 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 PRRX1P54821 245 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SLC34A1Q06495 639 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.55□□□□□ -1.84
SNCA-213ENST00000618500 IFFO1Q0D2I5 559 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 GK3PQ14409 553 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SNAPC1Q16533 368 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 C19orf54Q5BKX5 351 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SLX4IPQ5VYV7 408 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 METTL21CQ5VZV1 264 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 WDR93Q6P2C0 686 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 C10orf99Q6UWK7 81 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 C16orf89Q6UX73 402 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 C18orf65Q6ZTR6 163 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 DCXRQ7Z4W1 244 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 ARPINQ7Z6K5 226 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SLC35E3Q7Z769 313 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 RNF170Q96K19 258 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 LYZL4Q96KX0 146 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 ABCG5Q9H222 651 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 MOB1AQ9H8S9 216 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 PLEKHA1Q9HB21 404 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 ISYNA1Q9NPH2 558 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 FRRS1LQ9P0K9 344 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 PFDN2Q9UHV9 154 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 STUB1Q9UNE7 303 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SH3GLB1Q9Y371 365 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 A0A1W2PPI3 338 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 FAM90A10PA6NDY2 464 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 FXYD1O00168 92 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 DLGAP1O14490 977 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 ANGPT2O15123 496 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 RGS16O15492 202 aaPredicted RBP3.55□□□□□ -1.84
SNCA-213ENST00000618500 KITP10721 976 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 HIST1H1CP16403 213 aaKnown RBP3.55□□□□□ -1.84
SNCA-213ENST00000618500 MAP2K3P46734 347 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 RAB13P51153 203 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 MTPNP58546 118 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 ZNF616Q08AN1 781 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 KPNB1Q14974 876 aaKnown RBP3.55□□□□□ -1.84
SNCA-213ENST00000618500 TMEM30BQ3MIR4 351 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 MOGAT2Q3SYC2 334 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SPIN3Q5JUX0 258 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 LGALS9CQ6DKI2 356 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 WFDC3Q8IUB2 231 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 MICU2Q8IYU8 434 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 ZNF491Q8N8L2 437 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 ST6GALNAC6Q969X2 333 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 SEH1LQ96EE3 360 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 HIST1H2AAQ96QV6 131 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 OR51J1Q9H342 316 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 GHITMQ9H3K2 345 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 V9GYS6 101 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 TENM2Q9NT68 2774 aa3.55□□□□□ -1.84
SNCA-213ENST00000618500 RFPL4AA6NLU0 287 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ZNF729A6NN14 1252 aaPredicted RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 ZNF850A8MQ14 1090 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 B2RBV5 119 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 PRR23D1E9PI22 279 aaPredicted RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 RFPL4AL1F8VTS6 287 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 OVOL1O14753 267 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 MGST3O14880 152 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 TXNL1O43396 289 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 RRP9O43818 475 aaKnown RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 HTR3BO95264 441 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 IGLV1-51P01701 117 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 H1F0P07305 194 aaKnown RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 PRR23D2P0DMB1 279 aaPredicted RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 IGHV4-30-4P0DP06 118 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ACKR3P25106 362 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 PEX2P28328 305 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 IFNGR2P38484 337 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 P2RX3P56373 397 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ZNF121P58317 390 aaPredicted RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 ISL1P61371 349 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 PRB3Q04118 309 aaPredicted RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 ZNF146Q15072 292 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 AGKQ53H12 422 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 KHDC1LQ5JSQ8 128 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 LINC00311Q8N616 119 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 OR5T2Q8NGG2 359 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 OR10A6Q8NH74 314 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 NDNFQ8TB73 568 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 GNPDA2Q8TDQ7 276 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 EME1Q96AY2 570 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 C10orf35Q96D05 121 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 FAM46AQ96IP4 442 aaKnown RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 ERMAPQ96PL5 475 aaPredicted RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 SNTG1Q9NSN8 517 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ADA2Q9NZK5 511 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms