RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 LHX2P50458 406 aa12.18□□□□□ -0.46
PCDHGA3-202ENST00000612467 TAGLNQ01995 201 aaKnown RBP12.18□□□□□ -0.46
PCDHGA3-202ENST00000612467 OR2A2Q6IF42 318 aa12.18□□□□□ -0.46
PCDHGA3-202ENST00000612467 SLC25A26Q70HW3 274 aa12.18□□□□□ -0.46
PCDHGA3-202ENST00000612467 MRPL24Q96A35 216 aaKnown RBP12.18□□□□□ -0.46
PCDHGA3-202ENST00000612467 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDHGA3-202ENST00000612467 PCDHB10Q9UN67 800 aa12.18□□□□□ -0.46
PCDHGA3-202ENST00000612467 SCGB1D2O95969 90 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 APOC1P02654 83 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 FCGR3AP08637 254 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 SP9P0CG40 484 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 CD59P13987 128 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 CHATP28329 748 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 DUSP1P28562 367 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 CBX5P45973 191 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 CLDN18P56856 261 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 ABHD17BQ5VST6 288 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 SLC22A25Q6T423 547 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 BPIFCQ8NFQ6 507 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 TTTY12Q9BZ98 90 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 NMES1Q9C002 83 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 STRADBQ9C0K7 418 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 SHARPINQ9H0F6 387 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 SLC25A32Q9H2D1 315 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 TMEM231Q9H6L2 316 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 LIPGQ9Y5X9 500 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 TEX13DA0A0J9YY54 714 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 C5orf49A4QMS7 147 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 CDX4O14627 284 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 RBM39Q14498 530 aaKnown RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 TGIF1Q15583 401 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 OR56B2PQ8NGI1 322 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 SPSB1Q96BD6 273 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 PAPOLGQ9BWT3 736 aaKnown RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 SMIM3Q9BZL3 60 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 FAM117AQ9C073 453 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 MED9Q9NWA0 146 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 DNPH1O43598 174 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 DEFA5Q01523 94 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 SPEM2Q0P670 501 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 PDZK1IP1Q13113 114 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 CNN3Q15417 329 aaKnown RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 PAN3Q58A45 887 aaKnown RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 DBX2Q6ZNG2 339 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 HSD17B13Q7Z5P4 300 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 TMEM251Q8N6I4 163 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 ZNF611Q8N823 705 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 POC1AQ8NBT0 407 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 ADAT1Q9BUB4 502 aaKnown RBP12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 C12orf49Q9H741 205 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 RAB18Q9NP72 206 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 LHX6Q9UPM6 363 aa12.17□□□□□ -0.46
PCDHGA3-202ENST00000612467 ESPL1Q14674 2120 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 LILRA1O75019 489 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 OR7C1O76099 320 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 CD79AP11912 226 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 PIGPP57054 158 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 IAH1Q2TAA2 248 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 KRTAP27-1Q3LI81 207 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 DCAF10Q5QP82 559 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 ZNF585AQ6P3V2 769 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 OSR2Q8N2R0 312 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 SLAMF9Q96A28 289 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 BOKQ9UMX3 212 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 TMEM42Q69YG0 159 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 NUFIP2Q7Z417 695 aaKnown RBP12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 OR5L1Q8NGL2 311 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 BSCL2Q96G97 398 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 ZNF488Q96MN9 340 aa12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 LSM5Q9Y4Y9 91 aaKnown RBP12.16□□□□□ -0.46
PCDHGA3-202ENST00000612467 SVILO95425 2214 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 IGHV3-64DA0A0J9YX35 117 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 SNAPC5O75971 98 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 IFNA2P01563 188 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 PRKACAP17612 351 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 FCGR2CP31995 323 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 ID4P47928 161 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 GPM6AP51674 278 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 PLGLB1Q02325 96 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 PLEKHN1Q494U1 663 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 IGSF11Q5DX21 431 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 PDSS1Q5T2R2 415 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 PARP12Q9H0J9 701 aaKnown RBP12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 DEFB127Q9H1M4 99 aa12.15□□□□□ -0.46
PCDHGA3-202ENST00000612467 TERTO14746 1132 aaKnown RBP12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 F12P00748 615 aaPredicted RBP12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 OR5AC1P0C628 307 aa12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 BCL3P20749 454 aa12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 RBMXP38159 391 aaKnown RBP12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 RPL7L1Q6DKI1 246 aaKnown RBP12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 PRSS54Q6PEW0 395 aa12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 LHFPL2Q6ZUX7 228 aa12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 C2orf50Q96LR7 162 aa12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 FAM173AQ9BQD7 235 aa12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF442Q9H7R0 627 aa12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 PRSS50Q9UI38 385 aa12.15□□□□□ -0.47
PCDHGA3-202ENST00000612467 TRBV6-7A0A0A0MS04 114 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 A0A1W2PR80 420 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms