RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SDSLQ96GA7 329 aa11.55□□□□□ -0.56
RNF40-212ENST00000602784 NR1H4Q96RI1 486 aaPredicted RBP11.55□□□□□ -0.56
RNF40-212ENST00000602784 GPER1Q99527 375 aa11.55□□□□□ -0.56
RNF40-212ENST00000602784 CCL13Q99616 98 aa11.55□□□□□ -0.56
RNF40-212ENST00000602784 SNTG1Q9NSN8 517 aa11.55□□□□□ -0.56
RNF40-212ENST00000602784 HIF1ANQ9NWT6 349 aa11.55□□□□□ -0.56
RNF40-212ENST00000602784 KCNS2Q9ULS6 477 aa11.55□□□□□ -0.56
RNF40-212ENST00000602784 DOCK11Q5JSL3 2073 aa11.55□□□□□ -0.56
RNF40-212ENST00000602784 NIPBLQ6KC79 2804 aaeCLIP11.54□□□□□ -0.56
RNF40-212ENST00000602784 IGKV1-12A0A0C4DH73 117 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 NKX6-3A6NJ46 265 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 TRIM64CA6NLI5 447 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 RFPL4AA6NLU0 287 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 RFPL4AL1F8VTS6 287 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 F8VVB4 439 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 F8VWA3 439 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 J3QLI3 93 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 GABRPO00591 440 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 SIGLEC5O15389 551 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 PHF1O43189 567 aaPredicted RBP11.54□□□□□ -0.56
RNF40-212ENST00000602784 SPRY1O43609 319 aaPredicted RBP11.54□□□□□ -0.56
RNF40-212ENST00000602784 ARL6IP5O75915 188 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 INMTO95050 263 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 ECDO95905 644 aaPredicted RBP11.54□□□□□ -0.56
RNF40-212ENST00000602784 IGKV1D-12P01611 117 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 SRMP19623 302 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 BCL3P20749 454 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 PSMB9P28065 219 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 PRDX2P32119 198 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 NPBWR2P48146 333 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 LCN2P80188 198 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 FABP5Q01469 135 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 PAX2Q02962 417 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 HSD17B12Q53GQ0 312 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 FAM27D1Q5T7N8 215 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 CD276Q5ZPR3 534 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 ELP2Q6IA86 826 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 FIP1L1Q6UN15 594 aaKnown RBP11.54□□□□□ -0.56
RNF40-212ENST00000602784 ZNF561Q8N587 486 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 PNLDC1Q8NA58 520 aaKnown RBP11.54□□□□□ -0.56
RNF40-212ENST00000602784 Q8NFD4 153 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 OR5D18Q8NGL1 313 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 GAFA1Q96PS6 74 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 PPIL3Q9H2H8 161 aaKnown RBP11.54□□□□□ -0.56
RNF40-212ENST00000602784 LPAR2Q9HBW0 351 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 SMURF1Q9HCE7 757 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 TCF7L1Q9HCS4 588 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 HMG20AQ9NP66 347 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 OR5V1Q9UGF6 321 aa11.54□□□□□ -0.56
RNF40-212ENST00000602784 A0A0G2JMP0 313 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 A0A0X1KG70 313 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 TRDV1A0A1B0GX56 115 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 MAGEA13PA6NCF6 341 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 DVL1O14640 695 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 NDUFB3O43676 98 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 ANGPTL7O43827 346 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 CD37P11049 281 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 MTNR1BP49286 362 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 CAV3P56539 151 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 ZNF146Q15072 292 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 LRRC10Q5BKY1 277 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 SPIN3Q5JUX0 258 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 Q71RC1 249 aaPredicted RBP11.53□□□□□ -0.56
RNF40-212ENST00000602784 C1QL2Q7Z5L3 287 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 LYPD6Q86Y78 171 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 CD177Q8N6Q3 437 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 OR4M2Q8NGB6 313 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 TNFAIP8L1Q8WVP5 186 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 EMG1Q92979 244 aaKnown RBP11.53□□□□□ -0.56
RNF40-212ENST00000602784 MUL1Q969V5 352 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 DACT3Q96B18 629 aaPredicted RBP11.53□□□□□ -0.56
RNF40-212ENST00000602784 FOXRED1Q96CU9 486 aaPredicted RBP11.53□□□□□ -0.56
RNF40-212ENST00000602784 DMRTB1Q96MA1 342 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 UQCC2Q9BRT2 126 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 SLITRK2Q9H156 845 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 VCX3AQ9NNX9 186 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 RBFOX1Q9NWB1 397 aaKnown RBP11.53□□□□□ -0.56
RNF40-212ENST00000602784 IL36GQ9NZH8 169 aa11.53□□□□□ -0.56
RNF40-212ENST00000602784 SETD2Q9BYW2 2564 aaPredicted RBP11.53□□□□□ -0.56
RNF40-212ENST00000602784 WNK2Q9Y3S1 2297 aa11.52□□□□□ -0.56
RNF40-212ENST00000602784 LOC105371242A0A075B767 164 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 KIR2DS1A0A191URI9 304 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 FCN3O75636 299 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 MAS1P04201 325 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 LIPFP07098 398 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 SFTPBP07988 381 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 CHRM2P08172 466 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 ADRA2CP18825 462 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 GABRA2P47869 451 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 RSU1Q15404 277 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 DGUOKQ16854 277 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 DCAF12L2Q5VW00 463 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 LRRTM1Q86UE6 522 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 FAM216BQ8N7L0 139 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 RAB40AQ8WXH6 277 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 FAM234AQ9H0X4 552 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 MMP26Q9NRE1 261 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 PCDHB16Q9NRJ7 776 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 GLS2Q9UI32 602 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 MAB21L2Q9Y586 359 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms