RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 LYZL4Q96KX0 146 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 GPR61Q9BZJ8 451 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 ADGRL4Q9HBW9 690 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 SNTG1Q9NSN8 517 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 FAM206AQ9NX38 181 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 HAO2Q9NYQ3 351 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 ENPP5Q9UJA9 477 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 OR52A1Q9UKL2 312 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 COPS3Q9UNS2 423 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 PIGLQ9Y2B2 252 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 TSSC4Q9Y5U2 329 aaPredicted RBP12.43□□□□□ -0.42
LIG1-214ENST00000597146 SNX5Q9Y5X3 404 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 PCLOQ9Y6V0 5065 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 A6NDX4 124 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 ZNF732B4DXR9 585 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 H0YHG0 523 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 MAGEB4O15481 346 aaPredicted RBP12.42□□□□□ -0.42
LIG1-214ENST00000597146 CLIC3O95833 236 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 NDUFB7P17568 137 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 GPM6AP51674 278 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 EFNB1P98172 346 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 TMED1Q13445 227 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 DGUOKQ16854 277 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 ZNF684Q5T5D7 378 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 PLCXD3Q63HM9 321 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 WDR82Q6UXN9 313 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 PLEKHG7Q6ZR37 379 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 FAM220AQ7Z4H9 259 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 MKXQ8IYA7 352 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 TFAP2CQ92754 450 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 GAFA1Q96PS6 74 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 C9orf16Q9BUW7 83 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 GABARAPL3Q9BY60 117 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 PPP1R3EQ9H7J1 279 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 SLC25A10Q9UBX3 287 aaPredicted RBP12.42□□□□□ -0.42
LIG1-214ENST00000597146 R4GMQ9 66 aa12.42□□□□□ -0.42
LIG1-214ENST00000597146 NKX6-3A6NJ46 265 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 METTL15A6NJ78 407 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 EI24O14681 340 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 APOL3O95236 402 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 NRASP01111 189 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 LYL1P12980 280 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 COX7A1P24310 79 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 ACKR3P25106 362 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 ALDH3A2P51648 485 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 GNG3P63215 75 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 CEACAM21Q3KPI0 293 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 CEP78Q5JTW2 689 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 C10orf99Q6UWK7 81 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 ETV3LQ6ZN32 361 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 ZBTB49Q6ZSB9 765 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 MRPL41Q8IXM3 137 aaKnown RBP12.41□□□□□ -0.42
LIG1-214ENST00000597146 CBR4Q8N4T8 237 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 OR5A2Q8NGI9 324 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 OR5D13Q8NGL4 314 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 EME1Q96AY2 570 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 WDR13Q9H1Z4 485 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 MOB1AQ9H8S9 216 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 PALMDQ9NP74 551 aa12.41□□□□□ -0.42
LIG1-214ENST00000597146 NUFIP1Q9UHK0 495 aaKnown RBP12.41□□□□□ -0.42
LIG1-214ENST00000597146 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.41□□□□□ -0.42
LIG1-214ENST00000597146 LSM4Q9Y4Z0 139 aaKnown RBP12.41□□□□□ -0.42
LIG1-214ENST00000597146 VGLL3A8MV65 326 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 ZFPL1O95159 310 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 GABRA2P47869 451 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 DGCR2P98153 550 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 ODF4Q2M2E3 257 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 ATPAF1Q5TC12 328 aaPredicted RBP12.4□□□□□ -0.42
LIG1-214ENST00000597146 MEDAGQ5VYS4 303 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 FAM185AQ8N0U4 392 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 Q8NFD4 153 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 C12orf43Q96C57 262 aaKnown RBP12.4□□□□□ -0.42
LIG1-214ENST00000597146 MRPL48Q96GC5 212 aaKnown RBP12.4□□□□□ -0.42
LIG1-214ENST00000597146 MYCBPQ99417 103 aaPredicted RBP12.4□□□□□ -0.42
LIG1-214ENST00000597146 PLEKHA1Q9HB21 404 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 S100A14Q9HCY8 104 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 GNG8Q9UK08 70 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 GMPPBQ9Y5P6 360 aa12.4□□□□□ -0.42
LIG1-214ENST00000597146 PLECQ15149 4684 aaKnown RBP12.4□□□□□ -0.42
LIG1-214ENST00000597146 A0A1W2PQL4 384 aaPredicted RBP12.39□□□□□ -0.43
LIG1-214ENST00000597146 DAPL1A0PJW8 107 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 OR5B21A6NL26 309 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 H3BNX3 289 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 AKR7A2O43488 359 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 DHRS3O75911 302 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 SERPINA3P01011 423 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 ALDOBP05062 364 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 ALPLP05186 524 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 GLRA1P23415 457 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 MFGE8Q08431 387 aaPredicted RBP12.39□□□□□ -0.43
LIG1-214ENST00000597146 ZFAND6Q6FIF0 208 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 ZNF788Q6ZQV5 615 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 ELMOD2Q8IZ81 293 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 OR10Z1Q8NGY1 313 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 RNFT2Q96EX2 444 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 MED30Q96HR3 178 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 Q96MT0 163 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 PRR25Q96S07 402 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 USE1Q9NZ43 259 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 MRM2Q9UI43 246 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms