RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 EMX1Q04741 257 aaPredicted RBP15.26■□□□□ 0.03
CCDC43-205ENST00000592333 CNN3Q15417 329 aaKnown RBP15.26■□□□□ 0.03
CCDC43-205ENST00000592333 KPRPQ5T749 579 aaPredicted RBP15.26■□□□□ 0.03
CCDC43-205ENST00000592333 PLEKHG7Q6ZR37 379 aa15.26■□□□□ 0.03
CCDC43-205ENST00000592333 ZBTB49Q6ZSB9 765 aa15.26■□□□□ 0.03
CCDC43-205ENST00000592333 KLHDC1Q8N7A1 406 aa15.26■□□□□ 0.03
CCDC43-205ENST00000592333 ASCC1Q8N9N2 400 aaKnown RBP15.26■□□□□ 0.03
CCDC43-205ENST00000592333 RFKQ969G6 155 aa15.26■□□□□ 0.03
CCDC43-205ENST00000592333 IL4I1Q96RQ9 567 aa15.26■□□□□ 0.03
CCDC43-205ENST00000592333 ABCB10Q9NRK6 738 aa15.26■□□□□ 0.03
CCDC43-205ENST00000592333 MTCH1Q9NZJ7 389 aa15.26■□□□□ 0.03
CCDC43-205ENST00000592333 AP4S1Q9Y587 144 aa15.26■□□□□ 0.03
CCDC43-205ENST00000592333 FAM230AA0A1W2PPH8 454 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 A0A1W2PQL4 384 aaPredicted RBP15.25■□□□□ 0.03
CCDC43-205ENST00000592333 hADV38S2A0JD32 116 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 MAGEB4O15481 346 aaPredicted RBP15.25■□□□□ 0.03
CCDC43-205ENST00000592333 CHST1O43916 411 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 MITFO75030 526 aaPredicted RBP15.25■□□□□ 0.03
CCDC43-205ENST00000592333 RPP14O95059 124 aaKnown RBP15.25■□□□□ 0.03
CCDC43-205ENST00000592333 UBCP0CG48 685 aaKnown RBP15.25■□□□□ 0.03
CCDC43-205ENST00000592333 COX7A1P24310 79 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 UBE2V2Q15819 145 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 MINOS1Q5TGZ0 78 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 KCTD20Q7Z5Y7 419 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 BORCS8Q96FH0 119 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 ZNF714Q96N38 554 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 SIGLEC9Q9Y336 463 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 LINC00312Q9Y6C7 94 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 MINOS1-NBL1R4GNA1 71 aa15.25■□□□□ 0.03
CCDC43-205ENST00000592333 PRKDCP78527 4128 aaKnown RBP15.25■□□□□ 0.03
CCDC43-205ENST00000592333 A6NDX4 124 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 ARG1P05089 322 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 ERP29P30040 261 aaKnown RBP15.24■□□□□ 0.03
CCDC43-205ENST00000592333 RBP2P50120 134 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 EDDM3BP56851 147 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 OR12D2P58182 307 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 ISL1P61371 349 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 BNIP1Q12981 228 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 SPIN3Q5JUX0 258 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 ZNF782Q6ZMW2 699 aaPredicted RBP15.24■□□□□ 0.03
CCDC43-205ENST00000592333 SSX6Q7RTT6 188 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 REC114Q7Z4M0 266 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 LHFPL4Q7Z7J7 247 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 EGFL6Q8IUX8 553 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 TRMT10AQ8TBZ6 339 aaKnown RBP15.24■□□□□ 0.03
CCDC43-205ENST00000592333 TRUB1Q8WWH5 349 aaKnown RBP15.24■□□□□ 0.03
CCDC43-205ENST00000592333 GABARAPL3Q9BY60 117 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 PRSS22Q9GZN4 317 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 ZNF702PQ9H963 129 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 SERTAD4Q9NUC0 356 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 FOXJ3Q9UPW0 622 aa15.24■□□□□ 0.03
CCDC43-205ENST00000592333 MEGF11A6BM72 1044 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 A6NIN4 97 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 M0R129 80 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 XPNPEP2O43895 674 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 ATP5HO75947 161 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 CYB5AP00167 134 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 ALDOBP05062 364 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 AZGP1P25311 298 aaKnown RBP15.23■□□□□ 0.03
CCDC43-205ENST00000592333 PEX2P28328 305 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 ATP6V1E1P36543 226 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 ATP1B3P54709 279 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 CDC42P60953 191 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 ZNF146Q15072 292 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 BEAN1Q3B7T3 259 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 SAMD5Q5TGI4 173 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 TMEM244Q5VVB8 128 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 UTS2BQ765I0 119 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 FAM220AQ7Z4H9 259 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 CIB1Q99828 191 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 RHOFQ9HBH0 211 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 GLS2Q9UI32 602 aa15.23■□□□□ 0.03
CCDC43-205ENST00000592333 IGKV1-27A0A075B6S5 117 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 TRBV2A0A0J9YWF9 115 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 DYNC1I1O14576 645 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 ISG15P05161 165 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 PIPP12273 146 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-205ENST00000592333 PRKACBP22694 351 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 FAM189A2Q15884 450 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 SSX2Q16385 188 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 SLC25A26Q70HW3 274 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 NDUFA11Q86Y39 141 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 OR4S1Q8NGB4 309 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 WIPF2Q8TF74 440 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-205ENST00000592333 SESN1Q9Y6P5 492 aa15.22■□□□□ 0.03
CCDC43-205ENST00000592333 TMEM82A0PJX8 343 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 F8VVB4 439 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 F8VWA3 439 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 MGST3O14880 152 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 FBXO24O75426 580 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 HAND1O96004 215 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 RPSAP08865 295 aaKnown RBP15.21■□□□□ 0.03
CCDC43-205ENST00000592333 VSIG10L2P0DP72 767 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 IL18R1Q13478 541 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 FBLN7Q53RD9 439 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 SLC25A30Q5SVS4 291 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 FDX2Q6P4F2 183 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 C16orf82Q7Z2V1 217 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 DYNAPQ8N1N2 210 aa15.21■□□□□ 0.03
CCDC43-205ENST00000592333 OR10H4Q8NGA5 316 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms