RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, human

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2E-208	ENST00000591709	OR10Z1	Q8NGY1	313 aa		13.73	□□□□□ -0.21
POLR2E-208	ENST00000591709	NPFFR1	Q9GZQ6	430 aa		13.73	□□□□□ -0.21
POLR2E-208	ENST00000591709	OR51I2	Q9H344	312 aa		13.73	□□□□□ -0.21
POLR2E-208	ENST00000591709	PLEKHA1	Q9HB21	404 aa		13.73	□□□□□ -0.21
POLR2E-208	ENST00000591709	MEGF11	A6BM72	1044 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	OR5B21	A6NL26	309 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709		J3QLW9	94 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	DLGAP1	O14490	977 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	ZNF19	P17023	458 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	CCL1	P22362	96 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	PEX2	P28328	305 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	KIR3DL2	P43630	455 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	UBE2E1	P51965	193 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	ACSM1	Q08AH1	577 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	IKZF1	Q13422	519 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	LRRC75B	Q2VPJ9	315 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	HAGHL	Q6PII5	290 aa	Predicted RBP	13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	CRIP3	Q6Q6R5	217 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	LHFPL3	Q86UP9	236 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	RDH10	Q8IZV5	341 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	H1FX	Q92522	213 aa	Known RBP	13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	RDH12	Q96NR8	316 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	RAB18	Q9NP72	206 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	SERTAD4	Q9NUC0	356 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	MYRF	Q9Y2G1	1151 aa		13.72	□□□□□ -0.21
POLR2E-208	ENST00000591709	LOC107986453	A0A1B0GWG9	222 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	DHRS7C	A6NNS2	312 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	CLIC3	O95833	236 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	TFF1	P04155	84 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	SELL	P14151	372 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	GLRA1	P23415	457 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	TMEM42	Q69YG0	159 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709		Q6ZSR3	168 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	SLC36A1	Q7Z2H8	476 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	KCTD20	Q7Z5Y7	419 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	OR2G2	Q8NGZ5	317 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	ZNF671	Q8TAW3	534 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	APH1B	Q8WW43	257 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	CYGB	Q8WWM9	190 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	AQP3	Q92482	292 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	RNF166	Q96A37	237 aa	Predicted RBP	13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	C12orf43	Q96C57	262 aa	Known RBP	13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	C4orf36	Q96KX1	117 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	OCSTAMP	Q9BR26	566 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	DCTN5	Q9BTE1	182 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	FAM234A	Q9H0X4	552 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709	ZNF702P	Q9H963	129 aa		13.71	□□□□□ -0.21
POLR2E-208	ENST00000591709		A0A1W2PRX2	142 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	NDUFB3	O43676	98 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	FADS2	O95864	444 aa	Known RBP	13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	HTR1A	P08908	422 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	UBC	P0CG48	685 aa	Known RBP	13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	HAAO	P46952	286 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	KRTAP10-11	P60412	298 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	ACTA2	P62736	377 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	ACTG2	P63267	376 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	SMN1	Q16637	294 aa	Known RBP	13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	NCR3LG1	Q68D85	454 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	STUM	Q69YW2	141 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	OR52I1	Q8NGK6	324 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	MRPL48	Q96GC5	212 aa	Known RBP	13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	DMRTB1	Q96MA1	342 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	B9D2	Q9BPU9	175 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	ALG8	Q9BVK2	526 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	FRRS1L	Q9P0K9	344 aa		13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	RPL36	Q9Y3U8	105 aa	Known RBP	13.7	□□□□□ -0.22
POLR2E-208	ENST00000591709	FAM230A	A0A1W2PPH8	454 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	PQLC2L	A1A4F0	135 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	NKX6-3	A6NJ46	265 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	SYNGR1	O43759	233 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	WBP4	O75554	376 aa	Known RBP	13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	AMY2B	P19961	511 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	BMX	P51813	675 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	NANOS3	P60323	173 aa	Known RBP	13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	RAB40B	Q12829	278 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	GALE	Q14376	348 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	ZNF691	Q5VV52	312 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	ZNF573	Q86YE8	665 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	BATF2	Q8N1L9	274 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	PACRGL	Q8N7B6	248 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	C8orf46	Q8TAG6	207 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	PELI1	Q96FA3	418 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	ZNF488	Q96MN9	340 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	OR5M11	Q96RB7	305 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	ISG20L2	Q9H9L3	353 aa	Known RBP	13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	NLK	Q9UBE8	527 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	SLC7A11	Q9UPY5	501 aa		13.69	□□□□□ -0.22
POLR2E-208	ENST00000591709	OR2AT4	A6NND4	320 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709		J3QT63	122 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	ANGPTL7	O43827	346 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	IGHA1	P01876	353 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	GABRA2	P47869	451 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	COL10A1	Q03692	680 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	UBE2V2	Q15819	145 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	KLHL22	Q53GT1	634 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	LRRC10	Q5BKY1	277 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	TMEM244	Q5VVB8	128 aa		13.68	□□□□□ -0.22
POLR2E-208	ENST00000591709	TTC23	Q5W5X9	447 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms