RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 SLC25A10Q9UBX3 287 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-211ENST00000590499 FAM230AA0A1W2PPH8 454 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 RFPL4AA6NLU0 287 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 RFPL4AL1F8VTS6 287 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 TOX4O94842 621 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 FUT6P51993 359 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 UBA52P62987 128 aaKnown RBP9.22□□□□□ -0.93
SMAD4-211ENST00000590499 GABPB1Q06547 395 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-211ENST00000590499 IL18R1Q13478 541 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 KRTAP19-4Q3LI73 84 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 KLHL22Q53GT1 634 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 METTL11BQ5VVY1 283 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 UTS2BQ765I0 119 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 DHRSXQ8N5I4 330 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 KIR3DL3Q8N743 410 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 ZNRF1Q8ND25 227 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 DNAAF1Q8NEP3 725 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 RPS4Y2Q8TD47 263 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 NPRL2Q8WTW4 380 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 CYGBQ8WWM9 190 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 MYCBPQ99417 103 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-211ENST00000590499 MS4A7Q9GZW8 240 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-211ENST00000590499 PRDM13Q9H4Q3 707 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 CNTD2Q9H8S5 307 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 HHLA2Q9UM44 414 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 SLC7A11Q9UPY5 501 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 KPTNQ9Y664 436 aa9.22□□□□□ -0.93
SMAD4-211ENST00000590499 FBN3Q75N90 2809 aa9.21□□□□□ -0.93
SMAD4-211ENST00000590499 CENPVL3A0A0U1RRI6 287 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 DNAJC9-AS1A6NH13 148 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 F8VVB4 439 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 F8VWA3 439 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 TRIM77I1YAP6 450 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 NXPH2O95156 264 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 ZFPL1O95159 310 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 SERPINA3P01011 423 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 GNAO1P09471 354 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 CAPGP40121 348 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 GABRA2P47869 451 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 BPIFB3P59826 476 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 ARF6P62330 175 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 MRPL28Q13084 256 aaKnown RBP9.21□□□□□ -0.94
SMAD4-211ENST00000590499 CNN3Q15417 329 aaKnown RBP9.21□□□□□ -0.94
SMAD4-211ENST00000590499 GPR157Q5UAW9 335 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 RUSC1-AS1Q66K80 236 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 LAIR2Q6ISS4 152 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 BRD3OSQ6XYD6 125 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 Q8N7P7 452 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 SETD9Q8NE22 299 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 FGGYQ96C11 551 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 ELL3Q9HB65 397 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-211ENST00000590499 MTCH1Q9NZJ7 389 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 HSPE1-MOB4S4R3N1 261 aa9.21□□□□□ -0.94
SMAD4-211ENST00000590499 IGHV1-69DA0A0B4J2H0 117 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 MDFIC2A0A1B0GVS7 189 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 TMEM212A6NML5 194 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 H0YAE9 185 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 CLDN34H7C241 214 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 KNG1P01042 644 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 IGHV1-69P01742 117 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 MT-ND2P03891 347 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 ATF1P18846 271 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 PRTN3P24158 256 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 AZGP1P25311 298 aaKnown RBP9.2□□□□□ -0.94
SMAD4-211ENST00000590499 DCKP27707 260 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 PRDX2P32119 198 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 CEBPDP49716 269 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-211ENST00000590499 ETV1P50549 477 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 GTF2A1P52655 376 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-211ENST00000590499 PDCD1Q15116 288 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 XAF1Q6GPH4 301 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 CRIP3Q6Q6R5 217 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 METAP1DQ6UB28 335 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-211ENST00000590499 SLC25A26Q70HW3 274 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 VMO1Q7Z5L0 202 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 BATF2Q8N1L9 274 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 ZNF561Q8N587 486 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 ZNF676Q8N7Q3 588 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 TMEM185AQ8NFB2 350 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 HAVCR2Q8TDQ0 301 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 RGP1Q92546 391 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-211ENST00000590499 SPSB1Q96BD6 273 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 BORCS8Q96FH0 119 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 CEP19Q96LK0 163 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 PDCD1LG2Q9BQ51 273 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 DCLRE1BQ9H816 532 aa9.2□□□□□ -0.94
SMAD4-211ENST00000590499 UNKLQ9H9P5 680 aaKnown RBP9.2□□□□□ -0.94
SMAD4-211ENST00000590499 NKX1-2Q9UD57 310 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-211ENST00000590499 DIMT1Q9UNQ2 313 aaKnown RBP9.2□□□□□ -0.94
SMAD4-211ENST00000590499 TRBV23-1A0A0A0MS06 115 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 IRGMA1A4Y4 181 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 ZNF737O75373 536 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 RPSAP08865 295 aaKnown RBP9.19□□□□□ -0.94
SMAD4-211ENST00000590499 CCDC159P0C7I6 412 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 ZNF20P17024 532 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 NDUFB7P17568 137 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 PRKACBP22694 351 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 COMPP49747 757 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-211ENST00000590499 RBP2P50120 134 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 GBX2P52951 348 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms