RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 PKIBQ9C010 78 aa13.66□□□□□ -0.22
CROCCP3-203ENST00000589964 DPAGT1Q9H3H5 408 aa13.66□□□□□ -0.22
CROCCP3-203ENST00000589964 USE1Q9NZ43 259 aa13.66□□□□□ -0.22
CROCCP3-203ENST00000589964 DHRS7CA6NNS2 312 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 K7N7A8 449 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 PSPNO60542 156 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 SULT1C4O75897 302 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 ATP5HO75947 161 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 PAHP00439 452 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 BCL3P20749 454 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 RASSF2P50749 326 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 RAB13P51153 203 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 DEFA6Q01524 100 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 ACSM1Q08AH1 577 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 CCBE1Q6UXH8 406 aaPredicted RBP13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 FGGYQ96C11 551 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 LGALS12Q96DT0 336 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 PELI1Q96FA3 418 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 HRASLS5Q96KN8 279 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 CEP19Q96LK0 163 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 ZNF649Q9BS31 505 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 CHST6Q9GZX3 395 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 C16orf95Q9H693 158 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 ISG20L2Q9H9L3 353 aaKnown RBP13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 PLEKHA1Q9HB21 404 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 AMBNQ9NP70 447 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 FOXJ3Q9UPW0 622 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 MYRFQ9Y2G1 1151 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 POLDIP2Q9Y2S7 368 aa13.65□□□□□ -0.22
CROCCP3-203ENST00000589964 PRKDCP78527 4128 aaKnown RBP13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 SLC1A7O00341 560 aa13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 TSPAN9O75954 239 aa13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 ATP6V1E1P36543 226 aa13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 POU3F4P49335 361 aa13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 ZNF91Q05481 1191 aa13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 EDDM3AQ14507 147 aa13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 HABP2Q14520 560 aaPredicted RBP13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 C11orf44Q8N8P7 122 aa13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 OR4S1Q8NGB4 309 aa13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 IMPAD1Q9NX62 359 aa13.64□□□□□ -0.23
CROCCP3-203ENST00000589964 A0A1B0GUS0 222 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 OR4C45A6NMZ5 311 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 C17orf98A8MV24 154 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 SLC16A6O15403 523 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 EDDM3BP56851 147 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 SNRPGP62308 76 aaKnown RBP13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 MIDNQ504T8 468 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 GDPGP1Q6ZNW5 385 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 ENTHD1Q8IYW4 607 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 OR5D18Q8NGL1 313 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 OR5D13Q8NGL4 314 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 C4orf36Q96KX1 117 aa13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 SF3B6Q9Y3B4 125 aaKnown RBP13.63□□□□□ -0.23
CROCCP3-203ENST00000589964 FAM90A8PA6NJQ4 464 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 ODF3BA8MYP8 253 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 J3QLW9 94 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 HAND1O96004 215 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 ZNF19P17023 458 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 ATF1P18846 271 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 GDNFP39905 211 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 OR3A1P47881 315 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 ALDH3A2P51648 485 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 CDC42P60953 191 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 RPL15P61313 204 aaKnown RBP13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 BLMHQ13867 455 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 OCLNQ16625 522 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 LRRC75BQ2VPJ9 315 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 FDX2Q6P4F2 183 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 Q6ZS46 218 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 LHFPL3Q86UP9 236 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 TMEM219Q86XT9 240 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 C1QL4Q86Z23 238 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 EGFL6Q8IUX8 553 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 APH1BQ8WW43 257 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 EMG1Q92979 244 aaKnown RBP13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 ITFG2Q969R8 447 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 MEGF9Q9H1U4 602 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 ENOPH1Q9UHY7 261 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 SLC7A11Q9UPY5 501 aa13.62□□□□□ -0.23
CROCCP3-203ENST00000589964 DAPL1A0PJW8 107 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 UBCP0CG48 685 aaKnown RBP13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 AZGP1P25311 298 aaKnown RBP13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 FUT6P51993 359 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 SMN1Q16637 294 aaKnown RBP13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 SLC25A30Q5SVS4 291 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 XAF1Q6GPH4 301 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 FAM220AQ7Z4H9 259 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 OR8H2Q8N162 312 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 LYG1Q8N1E2 194 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 OR13C9Q8NGT0 318 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 RGP1Q92546 391 aaPredicted RBP13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 RFKQ969G6 155 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 TCF7L1Q9HCS4 588 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 ZNF581Q9P0T4 197 aa13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 EXOGQ9Y2C4 368 aaKnown RBP13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 CAB39Q9Y376 341 aaPredicted RBP13.61□□□□□ -0.23
CROCCP3-203ENST00000589964 FAM172BPA6NC97 362 aa13.6□□□□□ -0.23
CROCCP3-203ENST00000589964 BTBD17A6NE02 478 aa13.6□□□□□ -0.23
CROCCP3-203ENST00000589964 SIRPB1O00241 398 aa13.6□□□□□ -0.23
CROCCP3-203ENST00000589964 ZNF728P0DKX0 622 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms