RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 LIME1Q9H400 295 aa19.06■□□□□ 0.64
ACTN4-210ENST00000588618 DNAJB11Q9UBS4 358 aa19.06■□□□□ 0.64
ACTN4-210ENST00000588618 FBLN5Q9UBX5 448 aa19.06■□□□□ 0.64
ACTN4-210ENST00000588618 METTL21EPA6NDL7 271 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 FAM25AB3EWG3 89 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 FAM25CB3EWG5 89 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 FAM25GB3EWG6 89 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 DAOP14920 347 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 RAB6AP20340 208 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 EFNA4P52798 201 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 FGF12P61328 243 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 ELP2Q6IA86 826 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 IGFBPL1Q8WX77 278 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 NRGNQ92686 78 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 GAL3ST1Q99999 423 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 RHBDL2Q9NX52 303 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 RASL12Q9NYN1 266 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 SRRM5B3KS81 715 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 F12P00748 615 aaPredicted RBP19.05■□□□□ 0.64
ACTN4-210ENST00000588618 ELK1P19419 428 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 MRPS11P82912 194 aaKnown RBP19.05■□□□□ 0.64
ACTN4-210ENST00000588618 GCSAMQ8N6F7 178 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 OR51T1Q8NGJ9 327 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 CMTM3Q96MX0 182 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 ATG5Q9H1Y0 275 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 DCAF16Q9NXF7 216 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 ST3GAL6Q9Y274 331 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 CACNG2Q9Y698 323 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 POLQO75417 2590 aa19.05■□□□□ 0.64
ACTN4-210ENST00000588618 APCP25054 2843 aa19.04■□□□□ 0.64
ACTN4-210ENST00000588618 CPT2P23786 658 aa19.04■□□□□ 0.64
ACTN4-210ENST00000588618 SNU13P55769 128 aaKnown RBP19.04■□□□□ 0.64
ACTN4-210ENST00000588618 ERVK11-1P61568 191 aa19.04■□□□□ 0.64
ACTN4-210ENST00000588618 PEG10Q86TG7 708 aaKnown RBP19.04■□□□□ 0.64
ACTN4-210ENST00000588618 LRRC28Q86X40 367 aaPredicted RBP19.04■□□□□ 0.64
ACTN4-210ENST00000588618 CMTM4Q8IZR5 234 aa19.04■□□□□ 0.64
ACTN4-210ENST00000588618 CYYR1Q96J86 154 aa19.04■□□□□ 0.64
ACTN4-210ENST00000588618 HMG20AQ9NP66 347 aa19.04■□□□□ 0.64
ACTN4-210ENST00000588618 IL36RNQ9UBH0 155 aa19.04■□□□□ 0.64
ACTN4-210ENST00000588618 GLS2Q9UI32 602 aa19.04■□□□□ 0.64
ACTN4-210ENST00000588618 LY6HO94772 140 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 APOA1P02647 267 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 TALDO1P37837 337 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 Q8NFD4 153 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 RAB40AQ8WXH6 277 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 S100A16Q96FQ6 103 aaKnown RBP19.03■□□□□ 0.64
ACTN4-210ENST00000588618 WDR13Q9H1Z4 485 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 PLEKHA6Q9Y2H5 1048 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 VPS13CQ709C8 3753 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 A0A0A6YYD4 124 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 TMEM178BH3BS89 294 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 WNT9BO14905 357 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 EGR1P18146 543 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 TNFSF8P32971 234 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 KRTAP10-9P60411 292 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 RPS27AP62979 156 aaKnown RBP19.03■□□□□ 0.64
ACTN4-210ENST00000588618 MADCAM1Q13477 382 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 CARTPTQ16568 116 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 MICBQ29980 383 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 PIGYQ3MUY2 71 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 ACP7Q6ZNF0 438 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 DTX3Q8N9I9 347 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 SEH1LQ96EE3 360 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 LPAR5Q9H1C0 372 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 ZNF581Q9P0T4 197 aa19.03■□□□□ 0.64
ACTN4-210ENST00000588618 LYNX1G3V0Z9 82 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 SCGNO76038 276 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 LHBP01229 141 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 LYNX1P0DP58 116 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 GABRR1P24046 479 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 COL8A2P25067 703 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 ATP5J2P56134 94 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 RBM11P57052 281 aaKnown RBP19.02■□□□□ 0.63
ACTN4-210ENST00000588618 SFRP4Q6FHJ7 346 aaPredicted RBP19.02■□□□□ 0.63
ACTN4-210ENST00000588618 WDFY2Q96P53 400 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 NICN1Q9BSH3 213 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 HES4Q9HCC6 221 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 DIABLOQ9NR28 239 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 HECTD1Q9ULT8 2610 aa19.02■□□□□ 0.63
ACTN4-210ENST00000588618 ASH1LQ9NR48 2969 aaKnown RBP19.01■□□□□ 0.63
ACTN4-210ENST00000588618 CLDN25C9JDP6 229 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.01■□□□□ 0.63
ACTN4-210ENST00000588618 NDUFS7O75251 213 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 DNASE1P24855 282 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 PITPNBP48739 271 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 TAF9Q16594 264 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 MOGAT2Q3SYC2 334 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 SPIN3Q5JUX0 258 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 RTN4RL2Q86UN3 420 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 FAM90A1Q86YD7 464 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 OR56B1Q8NGI3 324 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 YIPF5Q969M3 257 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 TIMD4Q96H15 378 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 DIRAS2Q96HU8 199 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 Q96M66 194 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 ABCG5Q9H222 651 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 BARX1Q9HBU1 254 aaPredicted RBP19.01■□□□□ 0.63
ACTN4-210ENST00000588618 NLKQ9UBE8 527 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 OR14J1Q9UGF5 321 aa19.01■□□□□ 0.63
ACTN4-210ENST00000588618 PPIAL4EA0A075B759 164 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms