RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 FAM90A22PA8MWA6 464 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM90A12PA8MX19 464 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM90A5PA8MXJ8 464 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM90A23PA8MXZ1 464 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 SMAD9O15198 467 aaKnown RBP12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 SYNGR3O43761 229 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 KLF7O75840 302 aaPredicted RBP12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 HTR3BO95264 441 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM90A15PP0C7V4 464 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM90A13PP0C7W8 464 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM90A14PP0C7W9 464 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM90A24PP0C7X0 464 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 GLP1RP43220 463 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 UCP3P55916 312 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 TMPRSS3P57727 454 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 SUPT4H1P63272 117 aaKnown RBP12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 PJVKQ0ZLH3 352 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 IL15RAQ13261 267 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 HMGN3Q15651 99 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 ANKRD55Q3KP44 614 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 HES3Q5TGS1 186 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 DHRS11Q6UWP2 260 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 UNQ6126/PRO20091Q6UXV3 157 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM185AQ8N0U4 392 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 ZIC4Q8N9L1 334 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 CLRN3Q8NCR9 226 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 OR1S2Q8NGQ3 325 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 OR2V1Q8NHB1 315 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 OR14L1PQ8NHC6 308 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 DMRTA2Q96SC8 542 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 CMSS1Q9BQ75 279 aaKnown RBP12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 MESP1Q9BRJ9 268 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 ZNF2Q9BSG1 426 aaPredicted RBP12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 C1QTNF6Q9BXI9 259 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 ZNF286AQ9HBT8 521 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 CYTL1Q9NRR1 136 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 LPAR3Q9UBY5 353 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 NDRG3Q9UGV2 375 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 IL17BQ9UHF5 180 aa12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 CARHSP1Q9Y2V2 147 aaKnown RBP12.24□□□□□ -0.45
NEDD4L-223ENST00000588516 E5RGE8 158 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 K7EPK0 472 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 TNFSF11O14788 317 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 NRASP01111 189 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 LCATP04180 440 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 ZNF728P0DKX0 622 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 OR5H8P0DN80 308 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 GLRA1P23415 457 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 FLI1Q01543 452 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 MALLQ13021 153 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 KRTAP27-1Q3LI81 207 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 C10orf91Q5T1B1 145 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 DCAF12Q5T6F0 453 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 GPR157Q5UAW9 335 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 TMEM42Q69YG0 159 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 TMEM211Q6ICI0 200 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 RPUSD3Q6P087 351 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM71E2Q8N5Q1 922 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 LRTM2Q8N967 370 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 ADAMTS17Q8TE56 1095 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 PIGTQ969N2 578 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 CPNE4Q96A23 557 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 TMEM45BQ96B21 275 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 GALNT14Q96FL9 552 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 LIN37Q96GY3 246 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 SOX7Q9BT81 388 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 SEC11CQ9BY50 192 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 PROK2Q9HC23 129 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 PARPBPQ9NWS1 579 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 PURGQ9UJV8 347 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 PRELID1Q9Y255 219 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 NSG2Q9Y328 171 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 MGAQ8IWI9 3026 aa12.23□□□□□ -0.45
NEDD4L-223ENST00000588516 ZNF816-ZNF321PA0A0X1KG74 233 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 A0A1W2PP11 408 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 ZNF850A8MQ14 1090 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 ZNF705EA8MWA4 302 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 H7C2Y5 167 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 SDCBPO00560 298 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 SFTPBP07988 381 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 RPS2P15880 293 aaKnown RBP12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 IL32P24001 234 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 GABRR1P24046 479 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 UCNP55089 124 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 S100A10P60903 97 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 SSPNQ14714 243 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 SRSF7Q16629 238 aaKnown RBP eCLIP12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 RSPO1Q2MKA7 263 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 IAH1Q2TAA2 248 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 PABPC1L2AQ5JQF8 200 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 PHYHD1Q5SRE7 291 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 OSR2Q8N2R0 312 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 OR5D18Q8NGL1 313 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 NPRL2Q8WTW4 380 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 FBXO17Q96EF6 278 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 SMIM8Q96KF7 97 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 SLC5A7Q9GZV3 580 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 TAF9BQ9HBM6 251 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 PARP11Q9NR21 331 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 GPR173Q9NS66 373 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms