RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 KRTAP10-9P60411 292 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 GUCA2AQ02747 115 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 MZT1Q08AG7 82 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 ARFRP1Q13795 201 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 ZNF718Q3SXZ3 478 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 NHLRC3Q5JS37 347 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 SFRP4Q6FHJ7 346 aaPredicted RBP8.9□□□□□ -0.98
LIG3-203ENST00000585370 C3P1Q6ZMU1 363 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 RFPL4BQ6ZWI9 263 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 LINC00596Q86U02 117 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 SPERTQ8NA61 448 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 NAXEQ8NCW5 288 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 OR4C16Q8NGL9 310 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 OR1J1Q8NGS3 322 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 HPS1Q92902 700 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 PRRT1Q99946 306 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 VKORC1Q9BQB6 163 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 NICN1Q9BSH3 213 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 RTL8AQ9BWD3 113 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 PECRQ9BY49 303 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 NPDC1Q9NQX5 325 aaPredicted RBP8.9□□□□□ -0.98
LIG3-203ENST00000585370 NUDT15Q9NV35 164 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 PLEKHJ1Q9NW61 149 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 ETAA1Q9NY74 926 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 NKIRAS2Q9NYR9 191 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 GPR160Q9UJ42 338 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 ANAPC10Q9UM13 185 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 ALG5Q9Y673 324 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 NF1P21359 2839 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.89□□□□□ -0.99
LIG3-203ENST00000585370 A0A1W2PR80 420 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 TMEM210A6NLX4 147 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 TRAPPC2LH3BP13 241 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 SPRY1O43609 319 aaPredicted RBP8.89□□□□□ -0.99
LIG3-203ENST00000585370 CD3DP04234 171 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 ACAA1P09110 424 aaPredicted RBP8.89□□□□□ -0.99
LIG3-203ENST00000585370 CECR9P0C854 216 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 KITLGP21583 273 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 GCH1P30793 250 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 CCR6P51684 374 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 IL24Q13007 206 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 TSC22D1Q15714 1073 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 RNASE10Q5GAN6 216 aaKnown RBP8.89□□□□□ -0.99
LIG3-203ENST00000585370 FAM76BQ5HYJ3 339 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 PLAC9Q5JTB6 97 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 METTL11BQ5VVY1 283 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 MBNL2Q5VZF2 373 aaKnown RBP8.89□□□□□ -0.99
LIG3-203ENST00000585370 OR2T2Q6IF00 324 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 Q8IYB0 196 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 ZNF611Q8N823 705 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 OR10K1Q8NGX5 313 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 SLC25A40Q8TBP6 338 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 HPSE2Q8WWQ2 592 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 ST8SIA4Q92187 359 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 MARS2Q96GW9 593 aaKnown RBP8.89□□□□□ -0.99
LIG3-203ENST00000585370 ARHGAP5-AS1Q96IT6 56 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 DMRTA2Q96SC8 542 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 OR2J1Q9GZK6 312 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 CHST6Q9GZX3 395 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 ALX4Q9H161 411 aaPredicted RBP8.89□□□□□ -0.99
LIG3-203ENST00000585370 C20orf85Q9H1P6 137 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 POFUT1Q9H488 388 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 ZMAT3Q9HA38 289 aaKnown RBP8.89□□□□□ -0.99
LIG3-203ENST00000585370 GPN1Q9HCN4 374 aaPredicted RBP8.89□□□□□ -0.99
LIG3-203ENST00000585370 TMEM100Q9NV29 134 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 SLC2A8Q9NY64 477 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 EDARQ9UNE0 448 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 MED13LQ71F56 2210 aa8.89□□□□□ -0.99
LIG3-203ENST00000585370 INTS1Q8N201 2190 aaKnown RBP8.88□□□□□ -0.99
LIG3-203ENST00000585370 TRAV6A0A075B6T7 132 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 IGHV2OR16-5A0A0B4J2B6 119 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 IGHV1-18A0A0C4DH31 117 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 A0A0G2JNJ9 132 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 A0A1W2PP11 408 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 C16orf97H3BN30 126 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 ANGPTL7O43827 346 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 CRYAAP02489 173 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 IFNA6P05013 189 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 GLAP06280 429 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 PPP3CBP16298 524 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 FUT3P21217 361 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 HAAOP46952 286 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 GPM6AP51674 278 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 TAS2R46P59540 309 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 FGF12P61328 243 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
LIG3-203ENST00000585370 RPS23P62266 143 aaKnown RBP8.88□□□□□ -0.99
LIG3-203ENST00000585370 MRPS15P82914 257 aaKnown RBP8.88□□□□□ -0.99
LIG3-203ENST00000585370 MPV17LQ2QL34 196 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 DMRTC1Q5HYR2 192 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 CD276Q5ZPR3 534 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 SLC25A26Q70HW3 274 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 GLCCI1Q86VQ1 547 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 TMEM17Q86X19 198 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 HOGA1Q86XE5 327 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 BPIFB2Q8N4F0 458 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 RPRMLQ8N4K4 120 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 OR8G5Q8NG78 346 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 OR8S1Q8NH09 359 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 KLF14Q8TD94 323 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms