RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 RPL35P42766 123 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 AKR1D1P51857 326 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 HGFACQ04756 655 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PEA15Q15121 130 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SWI5Q1ZZU3 235 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 GPR137CQ8N3F9 429 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 LRTM2Q8N967 370 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RTN4IP1Q8WWV3 396 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 TOMM40LQ969M1 308 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 JSRP1Q96MG2 331 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZNF700Q9H0M5 742 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 UBE2ZQ9H832 354 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NSG2Q9Y328 171 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 COLCA2A8K830 154 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 G3V3Y1 287 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 TERTO14746 1132 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 COX6A1P12074 109 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RBP2P50120 134 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SSR4P51571 173 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 EXT1Q16394 746 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SP6Q3SY56 376 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 TDHQ8IZJ6 230 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SF3B5Q9BWJ5 86 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SRXN1Q9BYN0 137 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FAM212BQ9NTI7 297 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 WNT16Q9UBV4 365 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 STARD10Q9Y365 291 aa12.34□□□□□ -0.43
CDK5RAP3-237ENST00000585163 KIAA1549Q9HCM3 1950 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PQLC2LA1A4F0 135 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SELLP14151 372 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PAX6P26367 422 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CXCL12P48061 93 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ABCA11PQ4W5N1 156 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 TMEM42Q69YG0 159 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF774Q6NX45 483 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SUCNR1Q9BXA5 334 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CACFD1Q9UGQ2 172 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 TIMM10BQ9Y5J6 103 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 ZNF205O95201 554 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CST2P09228 141 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 IL11RAQ14626 422 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 LHFPL2Q6ZUX7 228 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OR10AD1Q8NGE0 317 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 BORCS8Q96FH0 119 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 MARS2Q96GW9 593 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 AKR1E2Q96JD6 320 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 RNF122Q9H9V4 155 aa12.33□□□□□ -0.44
CDK5RAP3-237ENST00000585163 H7C1Q1 480 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 GEMIN2O14893 280 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CBR3O75828 277 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 KLF7O75840 302 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SEC11BP0C7V7 166 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 LYZL2Q7Z4W2 148 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 M1APQ8TC57 530 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 C18orf12Q96KH6 178 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CRLF2Q9HC73 371 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SLC2A9Q9NRM0 540 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 COA4Q9NYJ1 87 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PTRH2Q9Y3E5 179 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 IGKV1-12A0A0C4DH73 117 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OR6C6A6NF89 314 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 GJE1A6NN92 205 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 DNPH1O43598 174 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 IGKV1D-12P01611 117 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 LCATP04180 440 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 DANCRP0C864 163 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 NTF4P34130 210 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PI4KAP42356 2102 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 UCP2P55851 309 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 RAC3P60763 192 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 HMGN3Q15651 99 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 KRTAP27-1Q3LI81 207 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PIGYQ3MUY2 71 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CLEC9AQ6UXN8 241 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 LIAT1Q6ZQX7 453 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 TMEM156Q8N614 296 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SECTM1Q8WVN6 248 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 DYRK2Q92630 601 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CLDN23Q96B33 292 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 BSCL2Q96G97 398 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 TMEM38BQ9NVV0 291 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 HS3ST3B1Q9Y662 390 aa12.32□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CCDC187A0A096LP49 1063 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 TSPAN15O95858 294 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 NRASP01111 189 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 KLK3P07288 261 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 FOLR2P14207 255 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SNCAP37840 140 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 KCNJ3P48549 501 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 PRSS12P56730 875 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 FXYD4P59646 89 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 TSPO2Q5TGU0 170 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 GPR157Q5UAW9 335 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OSR2Q8N2R0 312 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 COMMD1Q8N668 190 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 C2CD4CQ8TF44 421 aa12.31□□□□□ -0.44
CDK5RAP3-237ENST00000585163 NAT6Q93015 286 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms