RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 FGGYQ96C11 551 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 HEXA-AS1Q9H8Q6 139 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 BEX1Q9HBH7 125 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 HES4Q9HCC6 221 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 INPP5EQ9NRR6 644 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 FAM118AQ9NWS6 357 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 HHLA2Q9UM44 414 aa10.16□□□□□ -0.78
SS18-225ENST00000585121 RPL36Q9Y3U8 105 aaKnown RBP10.16□□□□□ -0.78
SS18-225ENST00000585121 A0A1W2PRD5 423 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 A0A1W2PRF3 423 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 A0A1W2PRM7 423 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 MEIOCA2RUB1 952 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 RNASEK-C17orf49H0YIS7 233 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 TK1P04183 234 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 ISG15P05161 165 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 DBTP11182 482 aaKnown RBP10.15□□□□□ -0.78
SS18-225ENST00000585121 IER3P46695 156 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 CEBPDP49716 269 aaPredicted RBP10.15□□□□□ -0.78
SS18-225ENST00000585121 ERVK11-1P61568 191 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 ZNF91Q05481 1191 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 ACSM1Q08AH1 577 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 RAB40BQ12829 278 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 MRPL28Q13084 256 aaKnown RBP10.15□□□□□ -0.78
SS18-225ENST00000585121 KLRD1Q13241 179 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 ALKBH1Q13686 389 aaKnown RBP10.15□□□□□ -0.78
SS18-225ENST00000585121 GALEQ14376 348 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 KLHL22Q53GT1 634 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 LHFPL2Q6ZUX7 228 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 SLC25A26Q70HW3 274 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 UTS2BQ765I0 119 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 LHFPL3Q86UP9 236 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 PIP4P2Q8N4L2 257 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 ASCC1Q8N9N2 400 aaKnown RBP10.15□□□□□ -0.78
SS18-225ENST00000585121 OR13C3Q8NGS6 347 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 SLAMF9Q96A28 289 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 C4orf36Q96KX1 117 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 NR1H4Q96RI1 486 aaPredicted RBP10.15□□□□□ -0.78
SS18-225ENST00000585121 ALG8Q9BVK2 526 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 FAM234AQ9H0X4 552 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 FRRS1LQ9P0K9 344 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 GLS2Q9UI32 602 aa10.15□□□□□ -0.78
SS18-225ENST00000585121 ANGPTL7O43827 346 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 INMTO95050 263 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 IGHV4-59P01825 116 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 ATF1P18846 271 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 OMGP23515 440 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 RAG2P55895 527 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 MTCP1P56278 107 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 COL10A1Q03692 680 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 PRB3Q04118 309 aaPredicted RBP10.14□□□□□ -0.79
SS18-225ENST00000585121 TMEM200BQ69YZ2 307 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 GDPGP1Q6ZNW5 385 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 SYS1Q8N2H4 156 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 DHRSXQ8N5I4 330 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 ZSCAN4Q8NAM6 433 aaPredicted RBP10.14□□□□□ -0.79
SS18-225ENST00000585121 OR4M1Q8NGD0 313 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 HAVCR2Q8TDQ0 301 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 TNFRSF14Q92956 283 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 EMG1Q92979 244 aaKnown RBP10.14□□□□□ -0.79
SS18-225ENST00000585121 SPSB1Q96BD6 273 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 ADAT3Q96EY9 351 aaPredicted RBP10.14□□□□□ -0.79
SS18-225ENST00000585121 PELI1Q96FA3 418 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 AMBNQ9NP70 447 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 C19orf12Q9NSK7 152 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 MTCH1Q9NZJ7 389 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 AASSQ9UDR5 926 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 MMP24Q9Y5R2 645 aa10.14□□□□□ -0.79
SS18-225ENST00000585121 IGKV1-27A0A075B6S5 117 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 GPR137BO60478 399 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 NDUFA7O95182 113 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 CCDC159P0C7I6 412 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 GABRB1P18505 474 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 MDKP21741 143 aaPredicted RBP10.13□□□□□ -0.79
SS18-225ENST00000585121 AZGP1P25311 298 aaKnown RBP10.13□□□□□ -0.79
SS18-225ENST00000585121 SAA4P35542 130 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 POU3F4P49335 361 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 GBX2P52951 348 aaPredicted RBP10.13□□□□□ -0.79
SS18-225ENST00000585121 NANOS3P60323 173 aaKnown RBP10.13□□□□□ -0.79
SS18-225ENST00000585121 MIDNQ504T8 468 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 TTC23Q5W5X9 447 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 GDPD3Q7L5L3 318 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 OR5R1Q8NH85 324 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 OPALINQ96PE5 141 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 ANKRD60Q9BZ19 345 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 COMMD4Q9H0A8 199 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 SLITRK2Q9H156 845 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 ZNRD1Q9P1U0 126 aa10.13□□□□□ -0.79
SS18-225ENST00000585121 TMEM212A6NML5 194 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 K7N7A8 449 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 IGHA1P01876 353 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 CAPGP40121 348 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 DLX1P56177 255 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 LGALS4P56470 323 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 EDDM3BP56851 147 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 ERVFRD-1P60508 538 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 ADARB1P78563 741 aaKnown RBP10.12□□□□□ -0.79
SS18-225ENST00000585121 C17orf107Q6ZR85 190 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 FAM58AQ8N1B3 248 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 PPP1R35Q8TAP8 253 aa10.12□□□□□ -0.79
SS18-225ENST00000585121 TAF15Q92804 592 aaKnown RBP eCLIP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms