RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 SSX1Q16384 188 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 LRRC10Q5BKY1 277 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 FAM27D1Q5T7N8 215 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 SYT6Q5T7P8 510 aaPredicted RBP11.6□□□□□ -0.55
TRAF4-215ENST00000584944 TEX36Q5VZQ5 186 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 AWAT2Q6E213 333 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 FAM166AQ6J272 317 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 ACP7Q6ZNF0 438 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 GLCCI1Q86VQ1 547 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 MUL1Q969V5 352 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 CCL13Q99616 98 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 SSBP3Q9BWW4 388 aaPredicted RBP11.6□□□□□ -0.55
TRAF4-215ENST00000584944 METTL9Q9H1A3 318 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 RHOFQ9HBH0 211 aa11.6□□□□□ -0.55
TRAF4-215ENST00000584944 TRDV1A0A1B0GX56 115 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 NOS1APO75052 506 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-215ENST00000584944 ZNF780AO75290 641 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-215ENST00000584944 CRLF1O75462 422 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 KDM4BO94953 1096 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 HTR3BO95264 441 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 MSMBP08118 114 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 ACAA1P09110 424 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-215ENST00000584944 IGFBP3P17936 291 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-215ENST00000584944 BCL3P20749 454 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 GALP22466 123 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 NPY4RP50391 375 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 LCN2P80188 198 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 CD276Q5ZPR3 534 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 C22orf42Q6IC83 251 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 ZNF529Q6P280 563 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 UNQ9370/PRO34162Q6UXP9 181 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 CDH26Q8IXH8 852 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 ASCC1Q8N9N2 400 aaKnown RBP11.59□□□□□ -0.55
TRAF4-215ENST00000584944 TMEM185AQ8NFB2 350 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 ST8SIA4Q92187 359 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 CHCHD6Q9BRQ6 235 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 UQCC2Q9BRT2 126 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 DNTTIP1Q9H147 329 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 YAE1D1Q9NRH1 226 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 RBFOX1Q9NWB1 397 aaKnown RBP11.59□□□□□ -0.55
TRAF4-215ENST00000584944 MTCH1Q9NZJ7 389 aa11.59□□□□□ -0.55
TRAF4-215ENST00000584944 MRPS28Q9Y2Q9 187 aaKnown RBP11.59□□□□□ -0.55
TRAF4-215ENST00000584944 TANC2Q9HCD6 1990 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 RFPL4AA6NLU0 287 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 RFPL4AL1F8VTS6 287 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 SH2D1BO14796 132 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 KNG1P01042 644 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 ZNF16P17020 682 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-215ENST00000584944 NDUFB7P17568 137 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 IL2RGP31785 369 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 PRDX2P32119 198 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 OR3A4PP47883 348 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 LMO4P61968 165 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 HOXA4Q00056 320 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-215ENST00000584944 SCN1BQ07699 218 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 SLC22A6Q4U2R8 563 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 SPIN3Q5JUX0 258 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 BTNL3Q6UXE8 466 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 TMEM91Q6ZNR0 172 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 PXT1Q8NFP0 134 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 SPATA3Q8NHX4 192 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 H1FXQ92522 213 aaKnown RBP11.58□□□□□ -0.56
TRAF4-215ENST00000584944 SEH1LQ96EE3 360 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 KCTD7Q96MP8 289 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 SCOCQ9UIL1 159 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 KCNS2Q9ULS6 477 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 CR1P17927 2039 aa11.58□□□□□ -0.56
TRAF4-215ENST00000584944 TRAV20A0A0B4J274 112 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 A0A0G2JMP0 313 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 A0A0X1KG70 313 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 PIN1P1O15428 100 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 PHF1O43189 567 aaPredicted RBP11.57□□□□□ -0.56
TRAF4-215ENST00000584944 SC5DO75845 299 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 CDRT1O95170 752 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 WNT2P09544 360 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 IGHV4-31P0DP07 118 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 CALCBP10092 127 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 PSG2P11465 335 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 GTF2F2P13984 249 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 HNF1AP20823 631 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 SERPINA2P20848 420 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 GABRR1P24046 479 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 MTNR1BP49286 362 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 GP2P55259 537 aaKnown RBP11.57□□□□□ -0.56
TRAF4-215ENST00000584944 STUMQ69YW2 141 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 GLIPR1L1Q6UWM5 242 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 LYPD2Q6UXB3 125 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 ZNF561Q8N587 486 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 OR4M2Q8NGB6 313 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 PPP1R35Q8TAP8 253 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 MSI2Q96DH6 328 aaKnown RBP11.57□□□□□ -0.56
TRAF4-215ENST00000584944 CST11Q9H112 138 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 SLC25A10Q9UBX3 287 aaPredicted RBP11.57□□□□□ -0.56
TRAF4-215ENST00000584944 SF3B6Q9Y3B4 125 aaKnown RBP11.57□□□□□ -0.56
TRAF4-215ENST00000584944 STAB1Q9NY15 2570 aa11.57□□□□□ -0.56
TRAF4-215ENST00000584944 CUBNO60494 3623 aa11.56□□□□□ -0.56
TRAF4-215ENST00000584944 LOC105371242A0A075B767 164 aa11.56□□□□□ -0.56
TRAF4-215ENST00000584944 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-215ENST00000584944 DVL1O14640 695 aa11.56□□□□□ -0.56
TRAF4-215ENST00000584944 DEGS1O15121 323 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms