RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZNF488Q96MN9 340 aa9.07□□□□□ -0.96
CCDC47-206ENST00000584112 NRIP2Q9BQI9 281 aa9.07□□□□□ -0.96
CCDC47-206ENST00000584112 ADI1Q9BV57 179 aa9.07□□□□□ -0.96
CCDC47-206ENST00000584112 PKIBQ9C010 78 aa9.07□□□□□ -0.96
CCDC47-206ENST00000584112 RIBC2Q9H4K1 309 aa9.07□□□□□ -0.96
CCDC47-206ENST00000584112 SLC22A13Q9Y226 551 aa9.07□□□□□ -0.96
CCDC47-206ENST00000584112 ORC6Q9Y5N6 252 aa9.07□□□□□ -0.96
CCDC47-206ENST00000584112 A6NIN4 97 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 ANGPTL7O43827 346 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 GATBO75879 557 aaKnown RBP9.06□□□□□ -0.96
CCDC47-206ENST00000584112 CLPXO76031 633 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 SERPINA3P01011 423 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 UBCP0CG48 685 aaKnown RBP9.06□□□□□ -0.96
CCDC47-206ENST00000584112 TGFBR2P37173 567 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 DLX1P56177 255 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 PRB3Q04118 309 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-206ENST00000584112 IL24Q13007 206 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 ODF4Q2M2E3 257 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 SSX6Q7RTT6 188 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 ZSCAN4Q8NAM6 433 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-206ENST00000584112 LINC01006Q8NI28 216 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 TRMT10AQ8TBZ6 339 aaKnown RBP9.06□□□□□ -0.96
CCDC47-206ENST00000584112 TRUB1Q8WWH5 349 aaKnown RBP9.06□□□□□ -0.96
CCDC47-206ENST00000584112 C10orf35Q96D05 121 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 FAM234AQ9H0X4 552 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 C16orf95Q9H693 158 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 HEXA-AS1Q9H8Q6 139 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 HES4Q9HCC6 221 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 C19orf12Q9NSK7 152 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 IMPAD1Q9NX62 359 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 USE1Q9NZ43 259 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 OR14J1Q9UGF5 321 aa9.06□□□□□ -0.96
CCDC47-206ENST00000584112 FAM230AA0A1W2PPH8 454 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 SAC3D1A6NKF1 404 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 APOL3O95236 402 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 TK1P04183 234 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 POLR2IP36954 125 aaKnown RBP9.05□□□□□ -0.96
CCDC47-206ENST00000584112 CEBPDP49716 269 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-206ENST00000584112 FUT6P51993 359 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 PROK1P58294 105 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 ERVK11-1P61568 191 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 ACTC1P68032 377 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 ACTA1P68133 377 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 CNN3Q15417 329 aaKnown RBP9.05□□□□□ -0.96
CCDC47-206ENST00000584112 AANATQ16613 207 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-206ENST00000584112 TMEM200BQ69YZ2 307 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 Q6ZSV7 163 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 CALHM1Q8IU99 346 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 MKXQ8IYA7 352 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 PNKDQ8N490 385 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 PP6455Q8WZ26 134 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 RORBQ92753 470 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 EME1Q96AY2 570 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 BORCS8Q96FH0 119 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 B9D2Q9BPU9 175 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 OCSTAMPQ9BR26 566 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 CHST5Q9GZS9 411 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 GNG8Q9UK08 70 aa9.05□□□□□ -0.96
CCDC47-206ENST00000584112 LOC107986453A0A1B0GWG9 222 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 WI2-2373I1.2A0A1W2PRP0 233 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 H3BUX3 64 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 TSPAN9O75954 239 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 CHRM2P08172 466 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 LGALS4P56470 323 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 ERVFRD-1P60508 538 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 UBE2V2Q15819 145 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 LRRC75BQ2VPJ9 315 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 TMEM244Q5VVB8 128 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 HCP5Q6MZN7 132 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 ZFP1Q6P2D0 407 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 ADAMTSL5Q6ZMM2 481 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 GDPD3Q7L5L3 318 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 KCTD20Q7Z5Y7 419 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 ANGPTL5Q86XS5 388 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 Q8IYB0 196 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 PRSS35Q8N3Z0 413 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 ASCC1Q8N9N2 400 aaKnown RBP9.04□□□□□ -0.96
CCDC47-206ENST00000584112 PYDC1Q8WXC3 89 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 HRASLS5Q96KN8 279 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 CEP19Q96LK0 163 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 MYCBPQ99417 103 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-206ENST00000584112 SSX3Q99909 188 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 RAB18Q9NP72 206 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 HERC1Q15751 4861 aa9.04□□□□□ -0.96
CCDC47-206ENST00000584112 SNTNA6NMZ2 147 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 H3BSH0 61 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 K7N7A8 449 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 CYB5AP00167 134 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 RBP4P02753 201 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 ALPLP05186 524 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 RBP2P50120 134 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 ATP1B3P54709 279 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 ISL1P61371 349 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 ZNF85Q03923 595 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 TP53I3Q53FA7 332 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 SLC25A30Q5SVS4 291 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 MEDAGQ5VYS4 303 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 LIAT1Q6ZQX7 453 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 C10orf67Q8IYJ2 551 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms