RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 Q9H521 79 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 AMBNQ9NP70 447 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 AURKAIP1Q9NWT8 199 aaPredicted RBP11.02□□□□□ -0.65
SS18-222ENST00000582792 MRM2Q9UI43 246 aaKnown RBP11.02□□□□□ -0.65
SS18-222ENST00000582792 DIMT1Q9UNQ2 313 aaKnown RBP11.02□□□□□ -0.65
SS18-222ENST00000582792 MPC1Q9Y5U8 109 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 RYR3Q15413 4870 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 TENM3Q9P273 2699 aa11.02□□□□□ -0.65
SS18-222ENST00000582792 A0A0U1RQV5 110 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 TMEM269A0A1B0GVZ9 245 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 MEGF11A6BM72 1044 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 TMEM210A6NLX4 147 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 AKR7A2O43488 359 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 ANGPTL7O43827 346 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 CHST1O43916 411 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 FBXO24O75426 580 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 SRSF10O75494 262 aaKnown RBP11.01□□□□□ -0.65
SS18-222ENST00000582792 APOL3O95236 402 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 CCDC159P0C7I6 412 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 EMX1Q04741 257 aaPredicted RBP11.01□□□□□ -0.65
SS18-222ENST00000582792 MRPL28Q13084 256 aaKnown RBP11.01□□□□□ -0.65
SS18-222ENST00000582792 MED21Q13503 144 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 GFOD2Q3B7J2 385 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 NSUN5P1Q3KNT7 163 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 FAM76BQ5HYJ3 339 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 FAM220AQ7Z4H9 259 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 SYS1Q8N2H4 156 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 OR5P3Q8WZ94 311 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 GGHQ92820 318 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 PGAM5Q96HS1 289 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 TBX5Q99593 518 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 ZNF649Q9BS31 505 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 MMP28Q9H239 520 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 ELL3Q9HB65 397 aaPredicted RBP11.01□□□□□ -0.65
SS18-222ENST00000582792 ABCB9Q9NP78 766 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 FKBP14Q9NWM8 211 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 FAM206AQ9NX38 181 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 ZNF319Q9P2F9 582 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 NLKQ9UBE8 527 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 NUFIP1Q9UHK0 495 aaKnown RBP11.01□□□□□ -0.65
SS18-222ENST00000582792 PSORS1C1Q9UIG5 152 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 EXOSC1Q9Y3B2 195 aaKnown RBP11.01□□□□□ -0.65
SS18-222ENST00000582792 R4GMQ9 66 aa11.01□□□□□ -0.65
SS18-222ENST00000582792 TRBV23-1A0A0A0MS06 115 aa11□□□□□ -0.65
SS18-222ENST00000582792 OR2AT4A6NND4 320 aa11□□□□□ -0.65
SS18-222ENST00000582792 DENRO43583 198 aaKnown RBP11□□□□□ -0.65
SS18-222ENST00000582792 ATP6V1B1P15313 513 aa11□□□□□ -0.65
SS18-222ENST00000582792 PAX6P26367 422 aa11□□□□□ -0.65
SS18-222ENST00000582792 PRDX4Q13162 271 aa11□□□□□ -0.65
SS18-222ENST00000582792 RNLSQ5VYX0 342 aa11□□□□□ -0.65
SS18-222ENST00000582792 FDX2Q6P4F2 183 aa11□□□□□ -0.65
SS18-222ENST00000582792 NDUFA11Q86Y39 141 aa11□□□□□ -0.65
SS18-222ENST00000582792 YIPF7Q8N8F6 280 aa11□□□□□ -0.65
SS18-222ENST00000582792 PIFOQ8TCI5 191 aa11□□□□□ -0.65
SS18-222ENST00000582792 PHF21AQ96BD5 680 aa11□□□□□ -0.65
SS18-222ENST00000582792 TMEM80Q96HE8 168 aa11□□□□□ -0.65
SS18-222ENST00000582792 FGF23Q9GZV9 251 aaPredicted RBP11□□□□□ -0.65
SS18-222ENST00000582792 SERTAD4Q9NUC0 356 aa11□□□□□ -0.65
SS18-222ENST00000582792 ERVK13-1Q9NX77 482 aa11□□□□□ -0.65
SS18-222ENST00000582792 SCN3BQ9NY72 215 aa11□□□□□ -0.65
SS18-222ENST00000582792 MYRFQ9Y2G1 1151 aa11□□□□□ -0.65
SS18-222ENST00000582792 SNX5Q9Y5X3 404 aa11□□□□□ -0.65
SS18-222ENST00000582792 IGKV1D-17A0A075B6S4 117 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 ZNF850A8MQ14 1090 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 PSMD9O00233 223 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 CST4P01036 141 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 IGLV3-1P01715 115 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 CD28P10747 220 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 ACKR3P25106 362 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 GABRA2P47869 451 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 Q6ZSR3 168 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 KCTD8Q6ZWB6 473 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 KRT74Q7RTS7 529 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 MKXQ8IYA7 352 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 FAM185AQ8N0U4 392 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 ZNRF1Q8ND25 227 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 CCDC54Q8NEL0 328 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 BPIFB6Q8NFQ5 453 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 OR4F17Q8NGA8 305 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 OR8B12Q8NGG6 310 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 HPSE2Q8WWQ2 592 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 R3HDM4Q96D70 268 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 RNF170Q96K19 258 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 OR4F4Q96R69 305 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 NKX3-1Q99801 234 aaPredicted RBP10.99□□□□□ -0.65
SS18-222ENST00000582792 ALG8Q9BVK2 526 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 PBOV1Q9GZY1 135 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 BRD7Q9NPI1 651 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 ZNF222Q9UK12 451 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 TPRKBQ9Y3C4 175 aa10.99□□□□□ -0.65
SS18-222ENST00000582792 LOC110117498-PIK3R3F6TDL0 507 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 SLC1A7O00341 560 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 RPSAP08865 295 aaKnown RBP10.98□□□□□ -0.65
SS18-222ENST00000582792 LIMS3P0CW19 117 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 LIMS4P0CW20 117 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 PSG2P11465 335 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 MYL12AP19105 171 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 GLRA1P23415 457 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 CCR9P51686 369 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms