RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 MED13Q9UHV7 2174 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 C21orf140B9A014 251 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 NRASP01111 189 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 CCL2P13500 99 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 MPZP25189 248 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 ZNF92Q03936 586 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 BRICD5Q6PL45 260 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 FAM89BQ8N5H3 189 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 INO80EQ8NBZ0 244 aaPredicted RBP11.88□□□□□ -0.51
SRSF1-205ENST00000582730 OR5AP2Q8NGF4 316 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 OR4A4PQ8NGN8 299 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 OCSTAMPQ9BR26 566 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 C5orf66Q9H5L9 145 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 SLC7A10Q9NS82 523 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 MBD2Q9UBB5 411 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 COL27A1Q8IZC6 1860 aaPredicted RBP11.88□□□□□ -0.51
SRSF1-205ENST00000582730 OR6C6A6NF89 314 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 KNG1P01042 644 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 PGAM2P15259 253 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 SERPINF1P36955 418 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 TAS2R31P59538 309 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 ARF1P84077 181 aaKnown RBP11.88□□□□□ -0.51
SRSF1-205ENST00000582730 VAX1Q5SQQ9 334 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 ATP1A1-AS1Q5TC04 95 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 PLCXD3Q63HM9 321 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 OR13G1Q8NGZ3 307 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 ARL11Q969Q4 196 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 SPSB1Q96BD6 273 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 C10orf35Q96D05 121 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 CNTNAP3BQ96NU0 1288 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 CDC6Q99741 560 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 ZNF581Q9P0T4 197 aa11.88□□□□□ -0.51
SRSF1-205ENST00000582730 FREM1Q5H8C1 2179 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 IL2RAP01589 272 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 RBP2P50120 134 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 TAS2R46P59540 309 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 RIPPLY2Q5TAB7 128 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 SLC16A13Q7RTY0 426 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 FAAP24Q9BTP7 215 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 MCTS1Q9ULC4 181 aaKnown RBP11.87□□□□□ -0.51
SRSF1-205ENST00000582730 IGKV1-27A0A075B6S5 117 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 SERPINE3A8MV23 424 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 DUS4LO95620 317 aaKnown RBP11.87□□□□□ -0.51
SRSF1-205ENST00000582730 HLA-HP01893 362 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 LHX2P50458 406 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 SNRPEP62304 92 aaKnown RBP11.87□□□□□ -0.51
SRSF1-205ENST00000582730 PDCD1Q15116 288 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 TMEM251Q8N6I4 163 aa11.87□□□□□ -0.51
SRSF1-205ENST00000582730 TTC28Q96AY4 2481 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 FABP1P07148 127 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 CD79AP11912 226 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 GLRA1P23415 457 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 OPRM1P35372 400 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 ALDH3B1P43353 468 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 FOXG1P55316 489 aaPredicted RBP11.86□□□□□ -0.51
SRSF1-205ENST00000582730 TMEM128Q5BJH2 165 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 FAM219AQ8IW50 185 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 CCDC54Q8NEL0 328 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 DYRK2Q92630 601 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 PIK3IP1Q96FE7 263 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 UQCC1Q9NVA1 299 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 MRPS18CQ9Y3D5 142 aaKnown RBP11.86□□□□□ -0.51
SRSF1-205ENST00000582730 ARID1AO14497 2285 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 IGKV1D-8A0A087WSZ0 117 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 FAM221AA4D161 298 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 ADAP1O75689 374 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 FAHD2BQ6P2I3 314 aaPredicted RBP11.86□□□□□ -0.51
SRSF1-205ENST00000582730 CPEB3Q8NE35 698 aaKnown RBP11.86□□□□□ -0.51
SRSF1-205ENST00000582730 CPNE2Q96FN4 548 aaPredicted RBP11.86□□□□□ -0.51
SRSF1-205ENST00000582730 FAHD2AQ96GK7 314 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 GPR132Q9UNW8 380 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 SLC7A11Q9UPY5 501 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 ZNF205O95201 554 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 RRADP55042 308 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 CLDN18P56856 261 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 FAM3AP98173 230 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 PIGYQ3MUY2 71 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 RBMS3Q6XE24 437 aaKnown RBP11.86□□□□□ -0.51
SRSF1-205ENST00000582730 MCEMP1Q8IX19 187 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 TMED6Q8WW62 240 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 LOXL4Q96JB6 756 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 TM2D1Q9BX74 207 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 TMEM9BQ9NQ34 198 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 FAM96BQ9Y3D0 163 aa11.86□□□□□ -0.51
SRSF1-205ENST00000582730 ZNF705EA8MWA4 302 aaPredicted RBP11.85□□□□□ -0.51
SRSF1-205ENST00000582730 ZNF587BE7ETH6 402 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 ZNF806P0C7X5 589 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 SPEM2Q0P670 501 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 AIMP2Q13155 320 aaKnown RBP11.85□□□□□ -0.51
SRSF1-205ENST00000582730 EIF3IQ13347 325 aaKnown RBP11.85□□□□□ -0.51
SRSF1-205ENST00000582730 TGIF1Q15583 401 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 CLEC18BQ6UXF7 455 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 TMEM230Q96A57 120 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 Q96M66 194 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 SCGB3A2Q96PL1 93 aa11.85□□□□□ -0.51
SRSF1-205ENST00000582730 METTL8Q9H825 291 aaKnown RBP11.85□□□□□ -0.51
SRSF1-205ENST00000582730 GSN-AS1Q9NRJ2 163 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms