RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	TRBV2	A0A0J9YWF9	115 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	IRGM	A1A4Y4	181 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	BTBD17	A6NE02	478 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	TMEM212	A6NML5	194 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708		J3QLW9	94 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF19	P17023	458 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ATF1	P18846	271 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	NANOS3	P60323	173 aa	Known RBP	10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	MEF2C	Q06413	473 aa	Predicted RBP	10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	AANAT	Q16613	207 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SLC25A26	Q70HW3	274 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	RDH10	Q8IZV5	341 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	FGGY	Q96C11	551 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ADAT3	Q96EY9	351 aa	Predicted RBP	10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF488	Q96MN9	340 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ALG8	Q9BVK2	526 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CHIA	Q9BZP6	476 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SIRT7	Q9NRC8	400 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ERVK13-1	Q9NX77	482 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNRD1	Q9P1U0	126 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	GLS2	Q9UI32	602 aa		10.31	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	IGKV1-27	A0A075B6S5	117 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF737	O75373	536 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	BAG2	O95816	211 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PAH	P00439	452 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	TFF1	P04155	84 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	AZGP1	P25311	298 aa	Known RBP	10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SAA4	P35542	130 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	GBX2	P52951	348 aa	Predicted RBP	10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	RAG2	P55895	527 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	MTCP1	P56278	107 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ERVFRD-1	P60508	538 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF146	Q15072	292 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CCDC58	Q4VC31	144 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SPIN3	Q5JUX0	258 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	TTC23	Q5W5X9	447 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	TMEM200B	Q69YZ2	307 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SAXO1	Q8IYX7	474 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	FAM185A	Q8N0U4	392 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR8H2	Q8N162	312 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF676	Q8N7Q3	588 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	BEND2	Q8NDZ0	799 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR5D14	Q8NGL3	314 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CPNE2	Q96FN4	548 aa	Predicted RBP	10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SNX22	Q96L94	193 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OPALIN	Q96PE5	141 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	COMMD4	Q9H0A8	199 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF696	Q9H7X3	374 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	FGF20	Q9NP95	211 aa	Predicted RBP	10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	C19orf12	Q9NSK7	152 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	C1RL	Q9NZP8	487 aa		10.3	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	IGKV1-9	A0A0C4DH69	117 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	MEIOC	A2RUB1	952 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	C17orf98	A8MV24	154 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	IGHV4-59	P01825	116 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OCM2	P0CE71	109 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OCM	P0CE72	109 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	DCK	P27707	260 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	COL10A1	Q03692	680 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PDZK1IP1	Q13113	114 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	IL18R1	Q13478	541 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PRR31	Q5SQ13	230 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	GDPD3	Q7L5L3	318 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	LHFPL3	Q86UP9	236 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SERPINA12	Q8IW75	414 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	FAM58A	Q8N1B3	248 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PARP16	Q8N5Y8	322 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	DTX3	Q8N9I9	347 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ASCC1	Q8N9N2	400 aa	Known RBP	10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SETD9	Q8NE22	299 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR13C3	Q8NGS6	347 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR5AK2	Q8NH90	309 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PPP1R35	Q8TAP8	253 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	EMG1	Q92979	244 aa	Known RBP	10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SLAMF9	Q96A28	289 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF649	Q9BS31	505 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ELL3	Q9HB65	397 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR14J1	Q9UGF5	321 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	VPREB3	Q9UKI3	123 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	MYRF	Q9Y2G1	1151 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PCDHGB5	Q9Y5G0	923 aa		10.29	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CLPSL1	A2RUU4	121 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	GPR137B	O60478	399 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZFPL1	O95159	310 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PEX2	P28328	305 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ERP29	P30040	261 aa	Known RBP	10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	TGFBR2	P37173	567 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	BMX	P51813	675 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF691	Q5VV52	312 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	TMPRSS11A	Q6ZMR5	421 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PDZD9	Q8IXQ8	264 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	C11orf42	Q8N5U0	333 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR52I1	Q8NGK6	324 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	APH1B	Q8WW43	257 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	MEGF9	Q9H1U4	602 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZCCHC4	Q9H5U6	513 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	HMG20A	Q9NP66	347 aa		10.28	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms