RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 CMC2Q9NRP2 79 aa2.9□□□□□ -1.94
CDH19-204ENST00000579658 ABRACLQ9P1F3 81 aa2.9□□□□□ -1.94
CDH19-204ENST00000579658 TEX13CA0A0J9YWL9 993 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 LOC102725191A0A1B0GVB3 256 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 RPS10-NUDT3A0A1W2PQS6 291 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 A0A1W2PRX2 142 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 DAPL1A0PJW8 107 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 UNC119BA6NIH7 251 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 E9PI62 339 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 DCTN6O00399 190 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 GPR171O14626 319 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 BET1O15155 118 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 OGG1O15527 345 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 OR6A2O95222 327 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 PPP1R3DO95685 299 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 PNPP00491 289 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 SERPINA3P01011 423 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 S100A9P06702 114 aaKnown RBP2.9□□□□□ -1.95
CDH19-204ENST00000579658 SBK2P0C263 348 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 PGA4P0DJD7 388 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 PGA3P0DJD8 388 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 VSIG8P0DPA2 414 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 RRASP10301 218 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 CXCL3P19876 107 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 EDN2P20800 178 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 CDKN2AP42771 156 aaKnown RBP2.9□□□□□ -1.95
CDH19-204ENST00000579658 COL10A1Q03692 680 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 HSF2Q03933 536 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 SPOCK1Q08629 439 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 BAMBIQ13145 260 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 GABRA6Q16445 453 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 MST1LQ2TV78 715 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 LBHQ53QV2 105 aaPredicted RBP2.9□□□□□ -1.95
CDH19-204ENST00000579658 ALG10Q5BKT4 473 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 MESTQ5EB52 335 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 BCL2L15Q5TBC7 163 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 LYPD4Q6UWN0 246 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 UNQ9370/PRO34162Q6UXP9 181 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 BAIAP2L2Q6UXY1 529 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 Q6ZT83 130 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 BHLHA15Q7RTS1 189 aaPredicted RBP2.9□□□□□ -1.95
CDH19-204ENST00000579658 FAM122BQ7Z309 247 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 SELENOHQ8IZQ5 122 aaKnown RBP2.9□□□□□ -1.95
CDH19-204ENST00000579658 TOMM5Q8N4H5 51 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 UXS1Q8NBZ7 420 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 ADPRHL1Q8NDY3 354 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 OR56B4Q8NH76 319 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 PHYHIPQ92561 330 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 NSMAFQ92636 917 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 TMEM186Q96B77 213 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 TSSK2Q96PF2 358 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 HCAR1Q9BXC0 346 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 NARFLQ9H6Q4 476 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 NOX3Q9HBY0 568 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 TREM1Q9NP99 234 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 NUDT15Q9NV35 164 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 ZNF224Q9NZL3 707 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 UPB1Q9UBR1 384 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 SCP2D1Q9UJQ7 156 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 SPATA2Q9UM82 520 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 IER3IP1Q9Y5U9 82 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 TGP01266 2768 aa2.9□□□□□ -1.95
CDH19-204ENST00000579658 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.89□□□□□ -1.95
CDH19-204ENST00000579658 CIB4A0PJX0 185 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 FAM183AA6NL82 134 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 ZNF726A6NNF4 738 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 G3V3Q6 166 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 PSMD9O00233 223 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 ABCD4O14678 606 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 PRAF2O60831 178 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 SAP30O75446 220 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 GATBO75879 557 aaKnown RBP2.89□□□□□ -1.95
CDH19-204ENST00000579658 VAMP5O95183 116 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 MPZL1O95297 269 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 MPC2O95563 127 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 LY86O95711 162 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 IGF2P01344 180 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 IFNA7P01567 189 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 LCATP04180 440 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 RNASE1P07998 156 aaKnown RBP2.89□□□□□ -1.95
CDH19-204ENST00000579658 UCHL1P09936 223 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 H2AFB2P0C5Z0 115 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 PRKACAP17612 351 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 TNFRSF1AP19438 455 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 RAB3BP20337 219 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 COX5AP20674 150 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 PRKACBP22694 351 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 ARL3P36405 182 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 RPL4P36578 427 aaKnown RBP2.89□□□□□ -1.95
CDH19-204ENST00000579658 SRP9P49458 86 aaKnown RBP2.89□□□□□ -1.95
CDH19-204ENST00000579658 OR10A3P58181 314 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 LOXL3P58215 753 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 RPL15P61313 204 aaKnown RBP2.89□□□□□ -1.95
CDH19-204ENST00000579658 RPL27P61353 136 aaKnown RBP2.89□□□□□ -1.95
CDH19-204ENST00000579658 RPS11P62280 158 aaKnown RBP eCLIP2.89□□□□□ -1.95
CDH19-204ENST00000579658 DHODHQ02127 395 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 ZNF85Q03923 595 aa2.89□□□□□ -1.95
CDH19-204ENST00000579658 SNTB2Q13425 540 aaKnown RBP2.89□□□□□ -1.95
CDH19-204ENST00000579658 KLF9Q13886 244 aaPredicted RBP2.89□□□□□ -1.95
CDH19-204ENST00000579658 ACSM3Q53FZ2 586 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms