RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 C21orf140B9A014 251 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 F5H768 121 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 H7C417 338 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 M0R036 132 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 FGF16O43320 207 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 AIREO43918 545 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 HPGDSO60760 199 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 FKBP6O75344 327 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 TNFAIP8O95379 198 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM50AO95807 157 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 IFNA17P01571 189 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SHBGP04278 402 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 CRYBA1P05813 215 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 HIST1H2AGP0C0S8 130 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 OR56A5P0C7T3 313 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 LIPCP11150 499 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 GPX2P18283 190 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 RAB3BP20337 219 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PMCHP20382 165 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 RPS9P46781 194 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 CLDN12P56749 244 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PLP1P60201 277 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 GNA12Q03113 381 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 TCP10Q12799 353 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 GK3PQ14409 553 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PSG5Q15238 335 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SURF2Q15527 256 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 NSDHLQ15738 373 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 DGUOKQ16854 277 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SCGB2B2Q4G0G5 96 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PYCR3Q53H96 274 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 OCIAD2Q56VL3 154 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SFT2D3Q587I9 215 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 CARD16Q5EG05 197 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 C6orf226Q5I0X4 101 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PYY3Q5JQD4 70 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM74A1Q5RGS3 127 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 AVPI1Q5T686 147 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 IDNKQ5T6J7 187 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 KDM4DQ6B0I6 523 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 HIST2H2AA3Q6FI13 130 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 NIPAL3Q6P499 406 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SMARCD3Q6STE5 483 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM205Q6UW68 189 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 LANCL3Q6ZV70 420 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SSX7Q7RTT5 188 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 ARPINQ7Z6K5 226 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 DHDDSQ86SQ9 333 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PARGQ86W56 976 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SKA3Q8IX90 412 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 BAP18Q8IXM2 172 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 CPNE9Q8IYJ1 553 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 DAW1Q8N136 415 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SMIM20Q8N5G0 67 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 ATPAF2Q8N5M1 289 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PACRGLQ8N7B6 248 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SUMF2Q8NBJ7 301 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 OR51S1Q8NGJ8 323 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 OR5K1Q8NHB7 308 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 LYPD6BQ8NI32 183 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 COQ8AQ8NI60 647 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF420Q8TAQ5 688 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 LGALS14Q8TCE9 139 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 CYGBQ8WWM9 190 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 HIST1H2ACQ93077 130 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 ISOC1Q96CN7 298 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 TLCD1Q96CP7 247 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 CCDC126Q96EE4 140 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 ITCHQ96J02 903 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 OR10C1Q96KK4 312 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 TBX5Q99593 518 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 CCDC32Q9BV29 185 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 CDCA4Q9BXL8 241 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 MS4A8Q9BY19 250 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 DUSP16Q9BY84 665 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 TLNRD1Q9H1K6 362 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 CACYBPQ9HB71 228 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM27Q9HBJ8 222 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PIPOXQ9P0Z9 390 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 JPT1Q9UK76 154 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PSG8Q9UQ74 426 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 FARSAQ9Y285 508 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC17A4Q9Y2C5 497 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 ZFP30Q9Y2G7 519 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 WDR45Q9Y484 360 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 OR10H1Q9Y4A9 318 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 DISP1Q96F81 1524 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 A2MP01023 1474 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 ABCC10Q5T3U5 1492 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 MLH3Q9UHC1 1453 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 NAV1Q8NEY1 1877 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 CTTNBP2Q8WZ74 1663 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TGIF2-C20orf24A0A0A6YYL0 155 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 IGHV7-81A0A0B4J1V7 117 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 A0A0G2JN53 185 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 SMCO3A2RU48 225 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 RNF222A6NCQ9 220 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 OR5H14A6NHG9 310 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM166BA8MTA8 275 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms