RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SIGLEC9Q9Y336 463 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 FAM96BQ9Y3D0 163 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 KPTNQ9Y664 436 aa5.08□□□□□ -1.6
NUP88-212ENST00000576708 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 A0A1B0GVI7 797 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 A0A1W2PPH5 198 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 MEIOCA2RUB1 952 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 ANXA2P2A6NMY6 339 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 PRR32B1ATL7 298 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 ZNF732B4DXR9 585 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 PRR23D1E9PI22 279 aaPredicted RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 F5H697 171 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 M0QZ24 198 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 MAGEB4O15481 346 aaPredicted RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 DCTN3O75935 186 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 CLPXO76031 633 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 CST4P01036 141 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 CST1P01037 141 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 LYNP07948 512 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 MRPL3P09001 348 aaKnown RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 FBP1P09467 338 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 PRR23D2P0DMB1 279 aaPredicted RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 T-ENOLP0DO92 83 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 NDUFB7P17568 137 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 DCTDP32321 178 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 S100A5P33763 92 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 SAA4P35542 130 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 GABRA2P47869 451 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 ETV1P50549 477 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 GPM6AP51674 278 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 BLVRAP53004 296 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 LY6EQ16553 131 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 MAJINQ3KP22 176 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 FAM98BQ52LJ0 330 aaKnown RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 LRRC10Q5BKY1 277 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 CEP78Q5JTW2 689 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 ATPAF1Q5TC12 328 aaPredicted RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 DHRS7BQ6IAN0 325 aaPredicted RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 SLC35E4Q6ICL7 350 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 HCP5Q6MZN7 132 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 C11orf88Q6PI97 169 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 ZNF788Q6ZQV5 615 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 SHFQ7M4L6 423 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 CPOQ8IVL8 374 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 BATF2Q8N1L9 274 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 ZSCAN4Q8NAM6 433 aaPredicted RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 CSNK2A3Q8NEV1 391 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 OR52H1Q8NGJ2 320 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 OTOSQ8NHW6 89 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 ANGPTL6Q8NI99 470 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 CCDC124Q96CT7 223 aaKnown RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 NRBF2Q96F24 287 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 DUS3LQ96G46 650 aaKnown RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 ZNF488Q96MN9 340 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 RTL8AQ9BWD3 113 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 CHID1Q9BWS9 393 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 PPA2Q9H2U2 334 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 NDE1Q9NXR1 346 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 ZNRD1Q9P1U0 126 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 SLC25A10Q9UBX3 287 aaPredicted RBP5.07□□□□□ -1.6
NUP88-212ENST00000576708 LRP12Q9Y561 859 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 MAB21L2Q9Y586 359 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 MPC1Q9Y5U8 109 aa5.07□□□□□ -1.6
NUP88-212ENST00000576708 VWFP04275 2813 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 IGKV1D-17A0A075B6S4 117 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 A0A1W2PQ09 198 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 MEX3AA1L020 520 aaKnown RBP5.06□□□□□ -1.6
NUP88-212ENST00000576708 PGPEP1LA6NFU8 196 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 NKX6-3A6NJ46 265 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 TMEM210A6NLX4 147 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 OR2AT4A6NND4 320 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 H3BUX3 64 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 GNGT2O14610 69 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 TIMM23O14925 209 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 ATP8B1O43520 1251 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 TSC22D2O75157 780 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 APOC1P02654 83 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 OPN1MWP04001 364 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 ACAA1P09110 424 aaPredicted RBP5.06□□□□□ -1.6
NUP88-212ENST00000576708 OPN1MW2P0DN77 364 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 OPN1MW3P0DN78 364 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 PSG2P11465 335 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 ALOX5APP20292 161 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 SLC2A5P22732 501 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 GLRA1P23415 457 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 CFL1P23528 166 aaKnown RBP5.06□□□□□ -1.6
NUP88-212ENST00000576708 EEF1B2P24534 225 aaKnown RBP5.06□□□□□ -1.6
NUP88-212ENST00000576708 SOX6P35712 828 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 CEBPDP49716 269 aaPredicted RBP5.06□□□□□ -1.6
NUP88-212ENST00000576708 ZNF134P52741 427 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 CDK5Q00535 292 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 IL5RAQ01344 420 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 METAP1DQ6UB28 335 aaPredicted RBP5.06□□□□□ -1.6
NUP88-212ENST00000576708 GDPGP1Q6ZNW5 385 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 MOB3CQ70IA8 216 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 BCDIN3DQ7Z5W3 292 aaKnown RBP5.06□□□□□ -1.6
NUP88-212ENST00000576708 MKXQ8IYA7 352 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 ZDHHC23Q8IYP9 409 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 FAM185AQ8N0U4 392 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 OR8H3Q8N146 312 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms