RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 FIGNL2A6NMB9 653 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 ZNHIT1O43257 154 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 MMP7P09237 267 aaPredicted RBP12.74□□□□□ -0.37
SCARF1-209ENST00000576012 SPINK2P20155 84 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 SFTPDP35247 375 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 CLRN1P58418 232 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 RAB11AP62491 216 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 C9orf50Q5SZB4 431 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 LANCL3Q6ZV70 420 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 LHFPL1Q86WI0 220 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 C9orf40Q8IXQ3 194 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 HPSE2Q8WWQ2 592 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 HAS2Q92819 552 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 UCK1Q9HA47 277 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 KCNIP3Q9Y2W7 256 aa12.74□□□□□ -0.37
SCARF1-209ENST00000576012 NSG1A0A0A6YYJ2 146 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 A0A1W2PR80 420 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 E5RGE8 158 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 HOXC4P09017 264 aaPredicted RBP12.73□□□□□ -0.37
SCARF1-209ENST00000576012 NR2C1P13056 603 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 ATP6V0CP27449 155 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 NTSR1P30989 418 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 TAS2R46P59540 309 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 OR10AD1Q8NGE0 317 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 NSG2Q9Y328 171 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 FAM230AA0A1W2PPH8 454 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 IFNL4K9M1U5 179 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 SLC31A2O15432 143 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 MT-ATP6P00846 226 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 HNRNPA2B1P22626 353 aaKnown RBP12.73□□□□□ -0.37
SCARF1-209ENST00000576012 WDR25Q64LD2 544 aaPredicted RBP12.73□□□□□ -0.37
SCARF1-209ENST00000576012 DTX1Q86Y01 620 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 RNASE11Q8TAA1 199 aaKnown RBP12.73□□□□□ -0.37
SCARF1-209ENST00000576012 ABHD5Q8WTS1 349 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 ASB10Q8WXI3 467 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 PGAM5Q96HS1 289 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 CHST11Q9NPF2 352 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 GNG13Q9P2W3 67 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 TERTO14746 1132 aaKnown RBP12.73□□□□□ -0.37
SCARF1-209ENST00000576012 SSSCA1O60232 199 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 GAPDHP04406 335 aaKnown RBP12.73□□□□□ -0.37
SCARF1-209ENST00000576012 DBHP09172 617 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 P2RY1P47900 373 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 SLC6A8P48029 635 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 RNF4P78317 190 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 SLC22A18ASQ8N1D0 253 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 HIST3H2BBQ8N257 126 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 SHDQ96IW2 340 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 WSB1Q9Y6I7 421 aa12.73□□□□□ -0.37
SCARF1-209ENST00000576012 ARHGAP21Q5T5U3 1957 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 IGHV5-51A0A0C4DH38 117 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 SMCO3A2RU48 225 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 SEC14L6B5MCN3 397 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 TCAPO15273 167 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 TNFP01375 233 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 HLA-HP01893 362 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 SEC11BP0C7V7 166 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 ZNF17P17021 662 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 RPL23AP62750 156 aaKnown RBP12.72□□□□□ -0.37
SCARF1-209ENST00000576012 OR8G1Q15617 311 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 SPIN3Q5JUX0 258 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 DPPA2Q7Z7J5 298 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 NIPSNAP3BQ9BS92 247 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 LHFPL6Q9Y693 200 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 ZNF728P0DKX0 622 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 EFNA3P52797 238 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 FGF8P55075 233 aaPredicted RBP12.72□□□□□ -0.37
SCARF1-209ENST00000576012 HIST2H3PS2Q5TEC6 136 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 SLC25A24Q6NUK1 477 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 WNT16Q9UBV4 365 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 A0A1W2PQF6 199 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 KIR2DL1P43626 348 aaPredicted RBP12.72□□□□□ -0.37
SCARF1-209ENST00000576012 H1FNTQ75WM6 255 aaPredicted RBP12.72□□□□□ -0.37
SCARF1-209ENST00000576012 REC114Q7Z4M0 266 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 OR5T1Q8NG75 326 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 SLC46A1Q96NT5 459 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 ZPBPQ9BS86 351 aa12.72□□□□□ -0.37
SCARF1-209ENST00000576012 DIDO1Q9BTC0 2240 aaKnown RBP12.71□□□□□ -0.37
SCARF1-209ENST00000576012 IL2RGP31785 369 aa12.71□□□□□ -0.37
SCARF1-209ENST00000576012 GNMTQ14749 295 aa12.71□□□□□ -0.37
SCARF1-209ENST00000576012 GRINAQ7Z429 371 aa12.71□□□□□ -0.37
SCARF1-209ENST00000576012 GALNT14Q96FL9 552 aa12.71□□□□□ -0.37
SCARF1-209ENST00000576012 FAM210BQ96KR6 192 aa12.71□□□□□ -0.37
SCARF1-209ENST00000576012 KCNK17Q96T54 332 aa12.71□□□□□ -0.37
SCARF1-209ENST00000576012 FBRSQ9HAH7 460 aa12.71□□□□□ -0.37
SCARF1-209ENST00000576012 PLEKHA2Q9HB19 425 aa12.71□□□□□ -0.37
SCARF1-209ENST00000576012 GPR173Q9NS66 373 aa12.71□□□□□ -0.37
SCARF1-209ENST00000576012 ST8SIA3O43173 380 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 SCGNO76038 276 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 FCARP24071 287 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 RAB1AP62820 205 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 PTPRSQ13332 1948 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 PPA1Q15181 289 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 MPV17LQ2QL34 196 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 AARDQ4LEZ3 155 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 LCN15Q6UWW0 184 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 LYPD6BQ8NI32 183 aa12.71□□□□□ -0.38
SCARF1-209ENST00000576012 ESPL1Q14674 2120 aa12.7□□□□□ -0.38
SCARF1-209ENST00000576012 CCDC187A0A096LP49 1063 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms