RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 OR8J1Q8NGP2 316 aa14.65□□□□□ -0.06
CHD3-214ENST00000572579 ADAT3Q96EY9 351 aaPredicted RBP14.65□□□□□ -0.06
CHD3-214ENST00000572579 CENPNQ96H22 339 aaPredicted RBP14.65□□□□□ -0.06
CHD3-214ENST00000572579 CHST5Q9GZS9 411 aa14.65□□□□□ -0.06
CHD3-214ENST00000572579 USE1Q9NZ43 259 aa14.65□□□□□ -0.06
CHD3-214ENST00000572579 AASSQ9UDR5 926 aa14.65□□□□□ -0.06
CHD3-214ENST00000572579 ODF3BA8MYP8 253 aa14.64□□□□□ -0.07
CHD3-214ENST00000572579 IGHA1P01876 353 aa14.64□□□□□ -0.07
CHD3-214ENST00000572579 CALCBP10092 127 aa14.64□□□□□ -0.07
CHD3-214ENST00000572579 NPBWR2P48146 333 aa14.64□□□□□ -0.07
CHD3-214ENST00000572579 NANOS3P60323 173 aaKnown RBP14.64□□□□□ -0.07
CHD3-214ENST00000572579 C1QL4Q86Z23 238 aa14.64□□□□□ -0.07
CHD3-214ENST00000572579 C11orf44Q8N8P7 122 aa14.64□□□□□ -0.07
CHD3-214ENST00000572579 CEP19Q96LK0 163 aa14.64□□□□□ -0.07
CHD3-214ENST00000572579 FRRS1LQ9P0K9 344 aa14.64□□□□□ -0.07
CHD3-214ENST00000572579 DNAH3Q8TD57 4116 aa14.64□□□□□ -0.07
CHD3-214ENST00000572579 LOC107986453A0A1B0GWG9 222 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 VGLL3A8MV65 326 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 H3BNX3 289 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 PSPNO60542 156 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 ENTPD6O75354 484 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 DUSP1P28562 367 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 FUT6P51993 359 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 TPRX1Q8N7U7 411 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 ASCC1Q8N9N2 400 aaKnown RBP14.63□□□□□ -0.07
CHD3-214ENST00000572579 OR10AC1Q8NH08 325 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 CFHR4Q92496 578 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 RBFOX1Q9NWB1 397 aaKnown RBP14.63□□□□□ -0.07
CHD3-214ENST00000572579 SLC7A11Q9UPY5 501 aa14.63□□□□□ -0.07
CHD3-214ENST00000572579 IGKV1-12A0A0C4DH73 117 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 MMP23AO75900 390 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 IGKV1D-12P01611 117 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 CHRM2P08172 466 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 ZNF728P0DKX0 622 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 FCGR1AP12314 374 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 OR12D2P58182 307 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 HABP2Q14520 560 aaPredicted RBP14.62□□□□□ -0.07
CHD3-214ENST00000572579 PLA1AQ53H76 456 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 Q6ZS46 218 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 EGFL6Q8IUX8 553 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 OR11H6Q8NGC7 330 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 OR2G2Q8NGZ5 317 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 PYDC1Q8WXC3 89 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 ZNF702PQ9H963 129 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 GNG8Q9UK08 70 aa14.62□□□□□ -0.07
CHD3-214ENST00000572579 A6NDX4 124 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 ALPLP05186 524 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 IGHV1-8P0DP01 117 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 BCL3P20749 454 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 EDDM3BP56851 147 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 TMED1Q13445 227 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 HERPUD1Q15011 391 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 SLC25A30Q5SVS4 291 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 ZNF626Q68DY1 528 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 BAIAP2L2Q6UXY1 529 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 OR8H2Q8N162 312 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 OR4S1Q8NGB4 309 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 OR51A4Q8NGJ6 313 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 SNX22Q96L94 193 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 CHST6Q9GZX3 395 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 SEBOXQ9HB31 216 aaPredicted RBP14.61□□□□□ -0.07
CHD3-214ENST00000572579 SERTAD4Q9NUC0 356 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 ENOPH1Q9UHY7 261 aa14.61□□□□□ -0.07
CHD3-214ENST00000572579 A0A1W2PPH5 198 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 ATP5HO75947 161 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 HAND1O96004 215 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 ARG1P05089 322 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 RASSF2P50749 326 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 ZNF91Q05481 1191 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 SSX2Q16385 188 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 ZIK1Q3SY52 487 aaPredicted RBP14.6□□□□□ -0.07
CHD3-214ENST00000572579 FDX2Q6P4F2 183 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 Q8N2B8 174 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 KLHDC1Q8N7A1 406 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 WIPF2Q8TF74 440 aaPredicted RBP14.6□□□□□ -0.07
CHD3-214ENST00000572579 FGGYQ96C11 551 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 HRASLS5Q96KN8 279 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 MBOAT4Q96T53 435 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 PLEKHA1Q9HB21 404 aa14.6□□□□□ -0.07
CHD3-214ENST00000572579 GATBO75879 557 aaKnown RBP14.59□□□□□ -0.07
CHD3-214ENST00000572579 CSF1P09603 554 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 GABRB1P18505 474 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 ATF1P18846 271 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 ATP6V1E1P36543 226 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 LGALS4P56470 323 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 EDDM3AQ14507 147 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 C2orf68Q2NKX9 166 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 UTF1Q5T230 341 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 TMEM219Q86XT9 240 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 CCDC54Q8NEL0 328 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 DNAAF1Q8NEP3 725 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 OR4C13Q8NGP0 309 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 TRUB1Q8WWH5 349 aaKnown RBP14.59□□□□□ -0.07
CHD3-214ENST00000572579 C10orf35Q96D05 121 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 MALSU1Q96EH3 234 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 RNFT2Q96EX2 444 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 BORCS8Q96FH0 119 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 ZNF649Q9BS31 505 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 ADI1Q9BV57 179 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 RANBP3Q9H6Z4 567 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms