RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 SVEP1Q4LDE5 3571 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 IGHV3OR15-7A0A075B7D8 119 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 LOC107986453A0A1B0GWG9 222 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 NKX6-3A6NJ46 265 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 OR2AT4A6NND4 320 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-219ENST00000569136 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-219ENST00000569136 CYB5AP00167 134 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 MT-ND2P03891 347 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 CPEP16870 476 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 ZNF20P17024 532 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 MPZP25189 248 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 KIR3DL2P43630 455 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 CD83Q01151 205 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 IL24Q13007 206 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 HNRNPA0Q13151 305 aaKnown RBP7.61□□□□□ -1.19
CAPN3-219ENST00000569136 UBE2V2Q15819 145 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 STUMQ69YW2 141 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 RBMS3Q6XE24 437 aaKnown RBP7.61□□□□□ -1.19
CAPN3-219ENST00000569136 BTN2A1Q7KYR7 527 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 SERPINA12Q8IW75 414 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 MKXQ8IYA7 352 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 BPIFB2Q8N4F0 458 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 POC1AQ8NBT0 407 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 C19orf18Q8NEA5 215 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 OR5AK2Q8NH90 309 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 SPATA3Q8NHX4 192 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 SPSB1Q96BD6 273 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 UPRTQ96BW1 309 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 FGGYQ96C11 551 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 BORCS8Q96FH0 119 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 SUCNR1Q9BXA5 334 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 FGF23Q9GZV9 251 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-219ENST00000569136 COMMD4Q9H0A8 199 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 WDR13Q9H1Z4 485 aa7.61□□□□□ -1.19
CAPN3-219ENST00000569136 CNOT2Q9NZN8 540 aaKnown RBP7.61□□□□□ -1.19
CAPN3-219ENST00000569136 DIMT1Q9UNQ2 313 aaKnown RBP7.61□□□□□ -1.19
CAPN3-219ENST00000569136 TRBV2A0A0J9YWF9 115 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 FAM230AA0A1W2PPH8 454 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 A6NIN4 97 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 RNF212BA8MTL3 300 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 ZNF879B4DU55 563 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 H0YHG0 523 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 SIGLEC5O15389 551 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 RHBDL1O75783 438 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 NXPH2O95156 264 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 CLIC3O95833 236 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 FSHBP01225 129 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 OCM2P0CE71 109 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 OCMP0CE72 109 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-219ENST00000569136 LIMS3P0CW19 117 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 LIMS4P0CW20 117 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 PGA5P0DJD9 388 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 PSG2P11465 335 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 PIPP12273 146 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-219ENST00000569136 EGR1P18146 543 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 ATF1P18846 271 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 PRDX2P32119 198 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 GABRA2P47869 451 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 RBP2P50120 134 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 MTCP1P56278 107 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 CAV3P56539 151 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 NANOS3P60323 173 aaKnown RBP7.6□□□□□ -1.19
CAPN3-219ENST00000569136 ST3GAL4Q11206 333 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 SMN1Q16637 294 aaKnown RBP7.6□□□□□ -1.19
CAPN3-219ENST00000569136 ARMCX4Q5H9R4 360 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 ACP7Q6ZNF0 438 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 ZNF788Q6ZQV5 615 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 Q8IYB0 196 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 CMTM4Q8IZR5 234 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 ZNF561Q8N587 486 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 OR5T2Q8NGG2 359 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 CNIH3Q8TBE1 160 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 GGHQ92820 318 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 FOXRED1Q96CU9 486 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-219ENST00000569136 SDSLQ96GA7 329 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 NRIP2Q9BQI9 281 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 ISG20L2Q9H9L3 353 aaKnown RBP7.6□□□□□ -1.19
CAPN3-219ENST00000569136 RHOFQ9HBH0 211 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 CTSZQ9UBR2 303 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 NKX1-2Q9UD57 310 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-219ENST00000569136 KPTNQ9Y664 436 aa7.6□□□□□ -1.19
CAPN3-219ENST00000569136 CHD3Q12873 2000 aaKnown RBP7.6□□□□□ -1.19
CAPN3-219ENST00000569136 A0A1W2PPH5 198 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 RFPL4AA6NLU0 287 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 RFPL4AL1F8VTS6 287 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 SLC1A7O00341 560 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 OGG1O15527 345 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 ZFPL1O95159 310 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 CD2P06729 351 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 CHRM2P08172 466 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 HSPA13P48723 471 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 ETV1P50549 477 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 GMFBP60983 142 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 FGF12P61328 243 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 ERVK11-1P61568 191 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 RIPK1Q13546 671 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 BLMHQ13867 455 aa7.59□□□□□ -1.19
CAPN3-219ENST00000569136 PDCD1Q15116 288 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms