RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	NOS1AP	O75052	506 aa	Predicted RBP	10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	MMP23A	O75900	390 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	H1F0	P07305	194 aa	Known RBP	10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	TMEM11	P17152	192 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	CNTFR	P26992	372 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	FMO3	P31513	532 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	ESRRG	P62508	458 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	ZNF616	Q08AN1	781 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	HAGH	Q16775	308 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	IFI44L	Q53G44	452 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	SLC35F1	Q5T1Q4	408 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	TRAPPC6B	Q86SZ2	158 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	OR8H2	Q8N162	312 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	BATF2	Q8N1L9	274 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM71E2	Q8N5Q1	922 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	OR8J3	Q8NGG0	315 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	MRPL18	Q9H0U6	180 aa	Known RBP	10.7	□□□□□ -0.7
SMG1-213	ENST00000567737	CD300A	Q9UGN4	299 aa		10.7	□□□□□ -0.7
SMG1-213	ENST00000567737		A0A1W2PRQ8	180 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM172BP	A6NC97	362 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A18P	A6NE21	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A16P	A6NEW6	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A20P	A6NIJ5	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	LINC01548	A6NM66	108 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A9P	A6NNJ1	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A12P	A8MX19	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A5P	A8MXJ8	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	BUB1B-PAK6	H3BSN5	160 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	TOR1A	O14656	332 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	ZNF737	O75373	536 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	IGLV1-47	P01700	117 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A15P	P0C7V4	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A13P	P0C7W8	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A14P	P0C7W9	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM90A24P	P0C7X0	464 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	HAAO	P46952	286 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	DGCR6	Q14129	220 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	HLA-DRB5	Q30154	266 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	TEX30	Q5JUR7	227 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	MOB3C	Q70IA8	216 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FKBP9P1	Q75LS8	142 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	TPRX1	Q8N7U7	411 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	TSPEAR	Q8WU66	669 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	ZNRF4	Q8WWF5	429 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	DCUN1D4	Q92564	292 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	HES4	Q9HCC6	221 aa		10.69	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM220BP	B1ANY3	271 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737		J3QT63	122 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	RRP9	O43818	475 aa	Known RBP	10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	ZNF682	O95780	498 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	RBM39	Q14498	530 aa	Known RBP	10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	TNFAIP8L3	Q5GJ75	292 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	ASPHD1	Q5U4P2	390 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	PLCXD3	Q63HM9	321 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	BAIAP2L2	Q6UXY1	529 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	ZNF573	Q86YE8	665 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737		Q8N1Y9	231 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	RPP25L	Q8N5L8	163 aa	Known RBP	10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	OR56B4	Q8NH76	319 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	RNF133	Q8WVZ7	376 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	NIPAL2	Q9H841	368 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	PCDHB16	Q9NRJ7	776 aa		10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	CHCHD3	Q9NX63	227 aa	Known RBP	10.68	□□□□□ -0.7
SMG1-213	ENST00000567737	HECTD4	Q9Y4D8	3996 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	H2BFM	P0C1H6	154 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	GPR12	P47775	334 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	PRRX1	P54821	245 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	HNF4G	Q14541	408 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	PRAMEF5	Q5TYX0	476 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	OR2T12	Q8NG77	320 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	TOMM40L	Q969M1	308 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	RPE	Q96AT9	228 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	HRASLS5	Q96KN8	279 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	SNX22	Q96L94	193 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	NKIRAS1	Q9NYS0	192 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	UBE2J1	Q9Y385	318 aa	Predicted RBP	10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM32A	Q9Y421	112 aa	Known RBP	10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	ENPP4	Q9Y6X5	453 aa		10.67	□□□□□ -0.7
SMG1-213	ENST00000567737	TRBV4-1	A0A0J9YWV2	114 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	LY6L	H3BQJ8	138 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	PSPN	O60542	156 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	ARSB	P15848	533 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	VDAC1	P21796	283 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	CDK2	P24941	298 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	PEX2	P28328	305 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	KRT74	Q7RTS7	529 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	OR6K6	Q8NGW6	343 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	C7orf26	Q96N11	449 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	FAM110A	Q9BQ89	295 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	ABHD6	Q9BV23	337 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	GAL3ST2	Q9H3Q3	398 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	CCDC134	Q9H6E4	229 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	ZNF286A	Q9HBT8	521 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737	RETN	Q9HD89	108 aa		10.66	□□□□□ -0.7
SMG1-213	ENST00000567737		I3L521	148 aa		10.65	□□□□□ -0.7
SMG1-213	ENST00000567737	HSPA12A	O43301	675 aa		10.65	□□□□□ -0.7
SMG1-213	ENST00000567737	IGKV1D-33	P01593	117 aa		10.65	□□□□□ -0.7
SMG1-213	ENST00000567737	IGKV1-33	P01594	117 aa		10.65	□□□□□ -0.7
SMG1-213	ENST00000567737	IGHG4	P01861	327 aa		10.65	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms