RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 ATF1P18846 271 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 GATA3P23771 443 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 PTBP1P26599 531 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLK3-218ENST00000566926 HTR2CP28335 458 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 THBS2P35442 1172 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.61
CLK3-218ENST00000566926 TALDO1P37837 337 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 CAV3P56539 151 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 SCGB2A2Q13296 93 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 ZNF846Q147U1 533 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 KCNJ8Q15842 424 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 C1orf100Q5SVJ3 147 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 METAP1DQ6UB28 335 aaPredicted RBP11.27□□□□□ -0.61
CLK3-218ENST00000566926 PRIMA1Q86XR5 153 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 LIN7BQ9HAP6 207 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 DCAF16Q9NXF7 216 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 GHRLQ9UBU3 117 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 MIOXQ9UGB7 285 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 PPIAL4AQ9Y536 164 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 A0A0G2JMP0 313 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 A0A0X1KG70 313 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 SMIM30A4D0T7 59 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 J3QLI3 93 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 TPPPO94811 219 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 PTBP3O95758 552 aaKnown RBP11.26□□□□□ -0.61
CLK3-218ENST00000566926 CYB5R3P00387 301 aaPredicted RBP11.26□□□□□ -0.61
CLK3-218ENST00000566926 NRASP01111 189 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 HCKP08631 526 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 ACKR3P25106 362 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 ZNF93P35789 620 aaPredicted RBP11.26□□□□□ -0.61
CLK3-218ENST00000566926 ZMYND11Q15326 602 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 UBE2NLQ5JXB2 153 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 BAIAP2L2Q6UXY1 529 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 LHFPL2Q6ZUX7 228 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 JAGN1Q8N5M9 183 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 OR4M2Q8NGB6 313 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 OR51A2Q8NGJ7 313 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 TRMT10AQ8TBZ6 339 aaKnown RBP11.26□□□□□ -0.61
CLK3-218ENST00000566926 ZFAND2BQ8WV99 257 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 RAB40AQ8WXH6 277 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 PTX4Q96A99 478 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 ORAI1Q96D31 301 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 GFI1Q99684 422 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 PALMDQ9NP74 551 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 AKIP1Q9NQ31 210 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 UFSP2Q9NUQ7 469 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 RNF7Q9UBF6 113 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 COMMD3Q9UBI1 195 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 MPC1Q9Y5U8 109 aa11.26□□□□□ -0.61
CLK3-218ENST00000566926 ANK3Q12955 4377 aaKnown RBP11.25□□□□□ -0.61
CLK3-218ENST00000566926 PPIAL4CA0A0B4J2A2 164 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 IGHV3-64DA0A0J9YX35 117 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 A6NLC8 198 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 CTDSP2O14595 271 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 BPNT1O95861 308 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 ANOS1P23352 680 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 AZGP1P25311 298 aaKnown RBP11.25□□□□□ -0.61
CLK3-218ENST00000566926 CD40LGP29965 261 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 FUT6P51993 359 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 ESCO2Q56NI9 601 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 DCAF12L2Q5VW00 463 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 PRAMEF6Q5VXH4 476 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 FAHD2BQ6P2I3 314 aaPredicted RBP11.25□□□□□ -0.61
CLK3-218ENST00000566926 NLRC3Q7RTR2 1065 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 CCDC190Q86UF4 302 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 LYPD6Q86Y78 171 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 ZDHHC23Q8IYP9 409 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 SAMD12Q8N8I0 201 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 C15orf40Q8WUR7 153 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 FAHD2AQ96GK7 314 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 HIST1H2AAQ96QV6 131 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 MICU1Q9BPX6 476 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 PAPOLGQ9BWT3 736 aaKnown RBP11.25□□□□□ -0.61
CLK3-218ENST00000566926 TMEM165Q9HC07 324 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 FBLN5Q9UBX5 448 aa11.25□□□□□ -0.61
CLK3-218ENST00000566926 A0A0A6YYH2 397 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 A6NJ64 397 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 OR5B21A6NL26 309 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 CEACAM18A8MTB9 384 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 F5H0A9 414 aaPredicted RBP11.24□□□□□ -0.61
CLK3-218ENST00000566926 SCGNO76038 276 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 GRPP07492 148 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 ARSBP15848 533 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 TNFSF8P32971 234 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 PMELP40967 661 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 RBP2P50120 134 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 KISS1Q15726 138 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 MPPED2Q15777 294 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 UBE2V2Q15819 145 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 CEACAM21Q3KPI0 293 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 HES5Q5TA89 166 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 IL17RELQ6ZVW7 336 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 LAX1Q8IWV1 398 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 OR52N4Q8NGI2 321 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 LGALS14Q8TCE9 139 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 BORCS5Q969J3 196 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 FAM3DQ96BQ1 224 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 BORCS8Q96FH0 119 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 NEIL1Q96FI4 390 aaPredicted RBP11.24□□□□□ -0.61
CLK3-218ENST00000566926 DIRAS2Q96HU8 199 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms