RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 OR2M4Q96R27 311 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 TAAR1Q96RJ0 339 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 HBEGFQ99075 208 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 MS4A6AQ9H2W1 248 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 ZDHHC11Q9H8X9 412 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 FBXO6Q9NRD1 293 aaPredicted RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 RBFOX1Q9NWB1 397 aaKnown RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 IL37Q9NZH6 218 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 COMMD9Q9P000 198 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 IL17CQ9P0M4 197 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 DEC1Q9P2X7 70 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 MOB4Q9Y3A3 225 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 HES2Q9Y543 173 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 F11RQ9Y624 299 aaKnown RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 NLRP1Q9C000 1473 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 TDRD15B5MCY1 1934 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 NFASCO94856 1347 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 IGHV3OR16-10A0A075B7F0 116 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 TGIF2-C20orf24A0A0A6YYL0 155 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 IGHV3OR16-9A0A0B4J2B5 98 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 IGHV1-69DA0A0B4J2H0 117 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 F5H5K5 113 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 H3BP45 60 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 MYL12BO14950 172 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC31A2O15432 143 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 NDUFS5O43920 106 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 ZNF432O94892 652 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 GABARAPO95166 117 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 SERPINA1P01009 418 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 ATF1P18846 271 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 PRPS1L1P21108 318 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 PSMB9P28065 219 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 TSPOP30536 169 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 PYCR1P32322 319 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 RCVRNP35243 200 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 MDH2P40926 338 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 PMELP40967 661 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 PSMB2P49721 201 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 DIO3P55073 304 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 UBE2NP61088 152 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 RAB14P61106 215 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 SARNPP82979 210 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 ZNF45Q02386 682 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 TAF1AQ15573 450 aaPredicted RBP2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 SNRNP35Q16560 246 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 TTLL9Q3SXZ7 439 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 HACD4Q5VWC8 232 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 STEAP4Q687X5 459 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 SPOPLQ6IQ16 392 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 LRRN1Q6UXK5 716 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 RNF165Q6ZSG1 346 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 AKAP14Q86UN6 197 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 CPNE9Q8IYJ1 553 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 OR4S2Q8NH73 311 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 OR1S1Q8NH92 325 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 NEIL3Q8TAT5 605 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 STOML3Q8TAV4 291 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 SYNPRQ8TBG9 265 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 RNF138Q8WVD3 245 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 FAM19A4Q96LR4 140 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 WFIKKN1Q96NZ8 548 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 TEAD3Q99594 435 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 DOK1Q99704 481 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 EBNA1BP2Q99848 306 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 C19orf24Q9BVV8 132 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC25A2Q9BXI2 301 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 PANK3Q9H999 370 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 DIABLOQ9NR28 239 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 OPN4Q9UHM6 478 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 STOML2Q9UJZ1 356 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 TP53TG5Q9Y2B4 290 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 V9GYQ6 96 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 RGPD3A6NKT7 1758 aaPredicted RBP2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 RGPD4Q7Z3J3 1758 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 PIK3C2AO00443 1686 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 ZFYVE9O95405 1425 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 FMN1Q68DA7 1419 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 C10orf71Q711Q0 1435 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 SCAPERQ9BY12 1400 aa2.5□□□□□ -2.01
HERPUD1-211ENST00000566550 LAMB4A4D0S4 1761 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 SLIT2O94813 1529 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 A0A0J9YXV3 536 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 EPM2AB3EWF7 344 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 E5RI56 91 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 H0Y9J4 135 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 H0YJX3 145 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 ACOX3O15254 700 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 STX10O60499 249 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RAD1O60671 282 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 REM1O75628 298 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 GATBO75879 557 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC22A5O76082 557 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 SOX14O95416 240 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 MOSP00540 346 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 IFNA16P05015 189 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 C8orf88P0DMB2 117 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 CD99P14209 185 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 SPNP16150 400 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RAB3AP20336 220 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms