RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 TNS2Q63HR2 1409 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 IGHV3-72A0A0B4J1Y9 119 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 GOLGA8QA0A0J9YX86 632 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 OR5H1A6NKK0 313 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 J3QT63 122 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 M0R1X1 148 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 RBFOX2O43251 390 aaKnown RBP eCLIP3.14□□□□□ -1.91
CNOT1-209ENST00000566240 VAMP5O95183 116 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 CST4P01036 141 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 IGHV3-11P01762 117 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 RPN2P04844 631 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 ADRA2AP08913 450 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 MMP7P09237 267 aaPredicted RBP3.14□□□□□ -1.91
CNOT1-209ENST00000566240 P2RY2P41231 377 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 C2orf80Q0P641 193 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 PTGES3Q15185 160 aaKnown RBP3.14□□□□□ -1.91
CNOT1-209ENST00000566240 USF2Q15853 346 aaPredicted RBP3.14□□□□□ -1.91
CNOT1-209ENST00000566240 RNASE13Q5GAN3 156 aaKnown RBP3.14□□□□□ -1.91
CNOT1-209ENST00000566240 ACTL10Q5JWF8 245 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 ZNF691Q5VV52 312 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 Q6ZSR6 202 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 COPS6Q7L5N1 327 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 DRAXINQ8NBI3 349 aaPredicted RBP3.14□□□□□ -1.91
CNOT1-209ENST00000566240 OR4M1Q8NGD0 313 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 UBALD1Q8TB05 177 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 ATP6V1G3Q96LB4 118 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 COA1Q9GZY4 146 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 ZNF430Q9H8G1 570 aaPredicted RBP3.14□□□□□ -1.91
CNOT1-209ENST00000566240 RHBDL2Q9NX52 303 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 NXT1Q9UKK6 140 aaKnown RBP3.14□□□□□ -1.91
CNOT1-209ENST00000566240 RAB23Q9ULC3 237 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 TFR2Q9UP52 801 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 SLC7A11Q9UPY5 501 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 POFUT2Q9Y2G5 429 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 AP3M1Q9Y2T2 418 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 YTHDF2Q9Y5A9 579 aaKnown RBP3.14□□□□□ -1.91
CNOT1-209ENST00000566240 WIF1Q9Y5W5 379 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 NACAE9PAV3 2078 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 MYH3P11055 1940 aa3.14□□□□□ -1.91
CNOT1-209ENST00000566240 NUP188Q5SRE5 1749 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 NRAPQ86VF7 1730 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 RGS12O14924 1447 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 TRAV8-6A0A0B4J262 113 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 M0R1B8 84 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 SPAM1P38567 509 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 RANBP1P43487 201 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 CXCL12P48061 93 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 PRLHRP49683 370 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 LRRC63Q05C16 580 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 XRCC4Q13426 336 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 PRSS8Q16651 343 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 SLC25A35Q3KQZ1 300 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 HHATQ5VTY9 493 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 Q5W150 140 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 SETD3Q86TU7 594 aaPredicted RBP3.13□□□□□ -1.91
CNOT1-209ENST00000566240 TTLQ8NG68 377 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 SYNPRQ8TBG9 265 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 ENKURQ8TC29 256 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 TMEM239Q8WW34 195 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 ADTRPQ96IZ2 230 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 ZNF285Q96NJ3 590 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 ALS2CR12Q96Q35 445 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 C1orf198Q9H425 327 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 EXOSC4Q9NPD3 245 aaKnown RBP3.13□□□□□ -1.91
CNOT1-209ENST00000566240 PPIL1Q9Y3C6 166 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 ITGB4P16144 1822 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 TUBGCP6Q96RT7 1819 aa3.13□□□□□ -1.91
CNOT1-209ENST00000566240 SPEF2Q9C093 1822 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 IGHV7-4-1A0A0J9YVY3 117 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 ERICH2A1L162 156 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 hCG_2039718K7EN88 272 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 ZNF593O00488 134 aaPredicted RBP3.12□□□□□ -1.91
CNOT1-209ENST00000566240 POLR3GO15318 223 aaPredicted RBP3.12□□□□□ -1.91
CNOT1-209ENST00000566240 ENSAO43768 121 aaKnown RBP3.12□□□□□ -1.91
CNOT1-209ENST00000566240 CCDC22O60826 627 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 ZNF806P0C7X5 589 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 C1GALT1C1LP0DN25 315 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 ME2P23368 584 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 PAX6P26367 422 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 IL12BP29460 328 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 OPRK1P41145 380 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 ERFP50548 548 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 VSNL1P62760 191 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 IL5RAQ01344 420 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 YIF1BQ5BJH7 314 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 ZFP1Q6P2D0 407 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 GUSBP11Q6P575 273 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 LRRC8AQ8IWT6 810 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 UBALD2Q8IYN6 164 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 ATPAF2Q8N5M1 289 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 CDRT4Q8N9R6 151 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 CIRBP-AS1Q8TBR5 109 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 SNF8Q96H20 258 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 CTRCQ99895 268 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 TIMM29Q9BSF4 260 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 PORCNQ9H237 461 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 GOLPH3Q9H4A6 298 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 ACOT13Q9NPJ3 140 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 NECAP2Q9NVZ3 263 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 MRM2Q9UI43 246 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms