RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	IGKV1-12	A0A0C4DH73	117 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	FAM230A	A0A1W2PPH8	454 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	FAM157A	C9JC47	383 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507		C9JQL5	133 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	RNASEK-C17orf49	H0YIS7	233 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	CBR3	O75828	277 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	IGKV1D-12	P01611	117 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	PVALB	P20472	110 aa	Predicted RBP	11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	DTYMK	P23919	212 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	PIGP	P57054	158 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZFP36L1	Q07352	338 aa	Known RBP	11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	CHAF1B	Q13112	559 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	RSU1	Q15404	277 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	KRTAP27-1	Q3LI81	207 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	RPS19BP1	Q86WX3	136 aa	Known RBP	11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	LYPD6B	Q8NI32	183 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	MR1	Q95460	341 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	MARS2	Q96GW9	593 aa	Known RBP	11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	MGA	Q8IWI9	3026 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	CCDC187	A0A096LP49	1063 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	FBXO24	O75426	580 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	JTB	O76095	146 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	KLK3	P07288	261 aa	Predicted RBP	11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	CST2	P09228	141 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	ID4	P47928	161 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	MLF1	P58340	268 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	RAC3	P60763	192 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	TMEM187	Q14656	261 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	TMEM156	Q8N614	296 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	AGBL5	Q8NDL9	886 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	OR1F12	Q8NHA8	337 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	GALNT14	Q96FL9	552 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	CPNE2	Q96FN4	548 aa	Predicted RBP	11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	CMSS1	Q9BQ75	279 aa	Known RBP	11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	SAV1	Q9H4B6	383 aa	Predicted RBP	11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	CRLF2	Q9HC73	371 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	PARP11	Q9NR21	331 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF175	Q9Y473	711 aa		11.42	□□□□□ -0.58
SCAPER-215	ENST00000565507	OR6C6	A6NF89	314 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	IFNA21	P01568	189 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	HEXA	P06865	529 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	NFYB	P25208	207 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	RBP2	P50120	134 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	SP6	Q3SY56	376 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	RAB11FIP2	Q7L804	512 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	OR10AD1	Q8NGE0	317 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	DYRK2	Q92630	601 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	ERGIC1	Q969X5	290 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	TMEM38B	Q9NVV0	291 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	NECAP2	Q9NVZ3	263 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	KIAA1549	Q9HCM3	1950 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507		A0A1W2PNU3	283 aa	Predicted RBP	11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF716	A6NP11	495 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF850	A8MQ14	1090 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	FARS2	O95363	451 aa	Known RBP	11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	MBP	P02686	304 aa	Predicted RBP	11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	SFTA3	P0C7M3	94 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	PATE4	P0C8F1	98 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF32	P17041	273 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	CNN3	Q15417	329 aa	Known RBP	11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF528	Q3MIS6	628 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	UBAC2	Q8NBM4	344 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	OR2Y1	Q8NGV0	311 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	NAA60	Q9H7X0	242 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	MLX	Q9UH92	298 aa		11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507	LSM5	Q9Y4Y9	91 aa	Known RBP	11.41	□□□□□ -0.58
SCAPER-215	ENST00000565507		A0A0G2JMM0	328 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507		A0A1W2PPB8	328 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507		A0A1W2PRS3	328 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	KIR3DP1	A8MWS1	328 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	GEMIN2	O14893	280 aa	Known RBP	11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	DNPH1	O43598	174 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	LCAT	P04180	440 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	OR5AC1	P0C628	307 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZNF728	P0DKX0	622 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	RFC3	P40938	356 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	FAM3A	P98173	230 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	PIGY	Q3MUY2	71 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	BRICD5	Q6PL45	260 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507		Q6ZPA2	131 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	GGN	Q86UU5	652 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	AKR7L	Q8NHP1	331 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	SLC39A7	Q92504	469 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	TOMM40L	Q969M1	308 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	BSCL2	Q96G97	398 aa	Predicted RBP	11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	SMIM3	Q9BZL3	60 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	ARV1	Q9H2C2	271 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	ZFP57	Q9NU63	452 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	PCNX2	A6NKB5	2137 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	MEX3A	A1L020	520 aa	Known RBP	11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	AGPAT2	O15120	278 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	B4GALT1	P15291	398 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	F2RL1	P55085	397 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	SMCO1	Q147U7	214 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	LHFPL2	Q6ZUX7	228 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	LRTM2	Q8N967	370 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	BORCS8	Q96FH0	119 aa		11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.4	□□□□□ -0.58
SCAPER-215	ENST00000565507	SHANK1	Q9Y566	2161 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms