RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 IGHMP01871 453 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 ZNF728P0DKX0 622 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SPINK2P20155 84 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 PAX6P26367 422 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 P2RY1P47900 373 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TMEM123Q8N131 208 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 KLHDC7BQ96G42 594 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 LMAN1LQ9HAT1 526 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CPAMD8Q8IZJ3 1885 aa17.91■□□□□ 0.46
MAP1LC3B-206ENST00000564844 MUC3AQ02505 3323 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 NSG1A0A0A6YYJ2 146 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CRYM-AS1A6NIL9 109 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 PLA2G5P39877 138 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CDX1P47902 265 aaPredicted RBP17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 AFF3P51826 1226 aaKnown RBP17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 RND3P61587 244 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TMEM176BQ3YBM2 270 aaPredicted RBP17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 NBEAQ8NFP9 2946 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 OR1N1Q8NGS0 311 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 C14orf144Q96I85 54 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CHST5Q9GZS9 411 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TREM2Q9NZC2 230 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 WNT16Q9UBV4 365 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 KIAA2026Q5HYC2 2103 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 FER1L5A0AVI2 2057 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST1H2BKO60814 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST1H2BJP06899 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST1H2BOP23527 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST1H2BBP33778 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST1H2BDP58876 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST1H2BCP62807 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SMAD4Q13485 552 aaKnown RBP17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 RHEBQ15382 184 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST2H2BEQ16778 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST1H2BHQ93079 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 MUCL1Q96DR8 90 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST1H2BNQ99877 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 HIST1H2BMQ99879 126 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 TUBA4BQ9H853 241 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 CD207Q9UJ71 328 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 SEC11BP0C7V7 166 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 NDUFB7P17568 137 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 AK3Q9UIJ7 227 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 ANXA10Q9UJ72 324 aa17.9■□□□□ 0.46
MAP1LC3B-206ENST00000564844 LIPT2A6NK58 231 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ZNF724A8MTY0 619 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 H3BMH7 237 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 FBLP22087 321 aaKnown RBP17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ATP6V0CP27449 155 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 MTCP1P56278 107 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 OR2T2Q6IF00 324 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 CRIP3Q6Q6R5 217 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ZNF610Q8N9Z0 462 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 OR1L3Q8NH93 324 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PLEKHA2Q9HB19 425 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 TUBD1Q9UJT1 453 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 RBFOX3A6NFN3 312 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 H3BP45 60 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 CSNK1A1P48729 337 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 OR1D5P58170 312 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 KHDC3LQ587J8 217 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SLC38A9Q8NBW4 561 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 NKX2-4Q9H2Z4 354 aa17.89■□□□□ 0.45
MAP1LC3B-206ENST00000564844 FOLR1P15328 257 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SLC22A25Q6T423 547 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ZNF429Q86V71 674 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 DDIT4LQ96D03 193 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 CRLF2Q9HC73 371 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ANAPC10Q9UM13 185 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 IGKV3D-11A0A0A0MRZ8 115 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SSSCA1O60232 199 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 IGHG1P01857 330 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 RNF4P78317 190 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ELOBQ15370 118 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PIGYQ3MUY2 71 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PRDM13Q9H4Q3 707 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ADAMTS9Q9P2N4 1935 aa17.88■□□□□ 0.45
MAP1LC3B-206ENST00000564844 GPR137BO60478 399 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SELLP14151 372 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 HPSE2Q8WWQ2 592 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SLC2A9Q9NRM0 540 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 GFOD1Q9NXC2 390 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ST8SIA3O43173 380 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 CLDN17P56750 224 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 TMEM187Q14656 261 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SPIN3Q5JUX0 258 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 DOK3Q7L591 496 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SLC35G3Q8N808 338 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 POM121Q96HA1 1249 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 A0A1W2PQD3 144 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 NKX2-6A6NCS4 301 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PPP1R2P9O14990 202 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 CTSDP07339 412 aaPredicted RBP17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ZNF43P17038 809 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 NKX6-1P78426 367 aaPredicted RBP17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 EWSR1Q01844 656 aaKnown RBP eCLIP17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 Q3ZCU0 254 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PRAMEF20Q5VT98 475 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 GINS3Q9BRX5 216 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms