RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 CELP19835 753 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 PRDX2P32119 198 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 SRP14P37108 136 aaKnown RBP14.31□□□□□ -0.12
USB1-209ENST00000564387 SOX2P48431 317 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 ZP1P60852 638 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 GPR50Q13585 617 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 KISS1Q15726 138 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 Q499Y3 187 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 LRRC10Q5BKY1 277 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 KLF17Q5JT82 389 aaPredicted RBP14.31□□□□□ -0.12
USB1-209ENST00000564387 PRSS48Q7RTY5 328 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 ZNF561Q8N587 486 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 ZSCAN4Q8NAM6 433 aaPredicted RBP14.31□□□□□ -0.12
USB1-209ENST00000564387 OR5M11Q96RB7 305 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 DCTN5Q9BTE1 182 aa14.31□□□□□ -0.12
USB1-209ENST00000564387 IGKV1-12A0A0C4DH73 117 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 RGS10O43665 173 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 KDM4BO94953 1096 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 IGKV1D-12P01611 117 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 MMP9P14780 707 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 ADRA2CP18825 462 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 RAB3AP20336 220 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 NPBWR2P48146 333 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 PNLDC1Q8NA58 520 aaKnown RBP14.3□□□□□ -0.12
USB1-209ENST00000564387 ZNRF1Q8ND25 227 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 OR51A2Q8NGJ7 313 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 OR13C5Q8NGS8 318 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 ST8SIA4Q92187 359 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 SLAMF9Q96A28 289 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 SPACA5Q96QH8 159 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 ISYNA1Q9NPH2 558 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 SLC25A10Q9UBX3 287 aaPredicted RBP14.3□□□□□ -0.12
USB1-209ENST00000564387 METRNQ9UJH8 293 aa14.3□□□□□ -0.12
USB1-209ENST00000564387 ATRQ13535 2644 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 ZNF879B4DU55 563 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 FSTP19883 344 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 GABRA2P47869 451 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 IKZF1Q13422 519 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 ZNF146Q15072 292 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 UNQ9370/PRO34162Q6UXP9 181 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 ASCL4Q6XD76 172 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 FAM234AQ9H0X4 552 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 SIRPDQ9H106 197 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 CNTD2Q9H8S5 307 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 TMEM138Q9NPI0 162 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 TAS2R4Q9NYW5 299 aa14.29□□□□□ -0.12
USB1-209ENST00000564387 SPRY1O43609 319 aaPredicted RBP14.28□□□□□ -0.12
USB1-209ENST00000564387 ZNF737O75373 536 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 CYB5AP00167 134 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 PLATP00750 562 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 BCL3P20749 454 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 SCGB2A2Q13296 93 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 TPBGQ13641 420 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 FAM58AQ8N1B3 248 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 MS4A15Q8N5U1 240 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 KIR3DL3Q8N743 410 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 Q8NFD4 153 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 PXT1Q8NFP0 134 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 OR52N4Q8NGI2 321 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 THRSPQ92748 146 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 RFT1Q96AA3 541 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 CPNE2Q96FN4 548 aaPredicted RBP14.28□□□□□ -0.12
USB1-209ENST00000564387 DERL3Q96Q80 235 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 HMG20AQ9NP66 347 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 RBFOX1Q9NWB1 397 aaKnown RBP14.28□□□□□ -0.12
USB1-209ENST00000564387 BLOC1S6Q9UL45 172 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 KPTNQ9Y664 436 aa14.28□□□□□ -0.12
USB1-209ENST00000564387 K7N7A8 449 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 PIN1P1O15428 100 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 MRPS14O60783 128 aaKnown RBP14.27□□□□□ -0.13
USB1-209ENST00000564387 SC5DO75845 299 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 CHRM2P08172 466 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 HCKP08631 526 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 OCMP0CE72 109 aaPredicted RBP14.27□□□□□ -0.13
USB1-209ENST00000564387 EPHA1P21709 976 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 POU3F4P49335 361 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 FGF12P61328 243 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 SPIN3Q5JUX0 258 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 ELP2Q6IA86 826 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 C1orf122Q6ZSJ8 110 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 C9orf139Q6ZV77 190 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 BATF2Q8N1L9 274 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 WDFY2Q96P53 400 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 OR14A2Q96R54 314 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 YTHDF1Q9BYJ9 559 aaKnown RBP14.27□□□□□ -0.13
USB1-209ENST00000564387 Q9H521 79 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 NUP50Q9UKX7 468 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 FOXJ3Q9UPW0 622 aa14.27□□□□□ -0.13
USB1-209ENST00000564387 TRAV8-7A0A075B6U6 113 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 TRBV23-1A0A0A0MS06 115 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 A0A0A6YYJ9 748 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 PNMA8CA0A1B0GUJ8 204 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 GABRPO00591 440 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 ANGPTL7O43827 346 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 TK1P04183 234 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 SFTPBP07988 381 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 TGFBR2P37173 567 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 CEBPDP49716 269 aaPredicted RBP14.26□□□□□ -0.13
USB1-209ENST00000564387 GABARAPL2P60520 117 aa14.26□□□□□ -0.13
USB1-209ENST00000564387 MED22Q15528 200 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms