RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 IFNA21P01568 189 aa17.32■□□□□ 0.36
MSLN-205ENST00000563941 IGHV3-9P01782 118 aa17.32■□□□□ 0.36
MSLN-205ENST00000563941 ZNF728P0DKX0 622 aa17.32■□□□□ 0.36
MSLN-205ENST00000563941 ADAMTS17Q8TE56 1095 aa17.32■□□□□ 0.36
MSLN-205ENST00000563941 LPAR3Q9UBY5 353 aa17.32■□□□□ 0.36
MSLN-205ENST00000563941 TUBD1Q9UJT1 453 aa17.32■□□□□ 0.36
MSLN-205ENST00000563941 ST3GAL6Q9Y274 331 aa17.32■□□□□ 0.36
MSLN-205ENST00000563941 DOCK10Q96BY6 2186 aa17.32■□□□□ 0.36
MSLN-205ENST00000563941 ZNF816-ZNF321PA0A0X1KG74 233 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 FAM221AA4D161 298 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 FAM74A7A6NL05 159 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 NUDT19A8MXV4 375 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 TAAR5O14804 337 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 XRCC2O43543 280 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 FARS2O95363 451 aaKnown RBP17.31■□□□□ 0.36
MSLN-205ENST00000563941 FAM74A3Q4VXF1 159 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 PABPC1L2AQ5JQF8 200 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 RPL7L1Q6DKI1 246 aaKnown RBP17.31■□□□□ 0.36
MSLN-205ENST00000563941 SPINK14Q6IE38 97 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 SLC22A25Q6T423 547 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 MMP26Q9NRE1 261 aa17.31■□□□□ 0.36
MSLN-205ENST00000563941 BOKQ9UMX3 212 aaPredicted RBP17.31■□□□□ 0.36
MSLN-205ENST00000563941 ZNF587BE7ETH6 402 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 ADCYAP1P18509 176 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 EIF5AP63241 154 aaKnown RBP17.3■□□□□ 0.36
MSLN-205ENST00000563941 SPEM2Q0P670 501 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 MST1LQ2TV78 715 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 CCDC157Q569K6 752 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 PDSS1Q5T2R2 415 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 TSPO2Q5TGU0 170 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 OR2A2Q6IF42 318 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 TCEAL6Q6IPX3 200 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 TCEAL3Q969E4 200 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 TMEM45BQ96B21 275 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 THOC3Q96J01 351 aaKnown RBP17.3■□□□□ 0.36
MSLN-205ENST00000563941 TSNAXQ99598 290 aaKnown RBP17.3■□□□□ 0.36
MSLN-205ENST00000563941 LRFN1Q9P244 771 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 ZDBF2Q9HCK1 2354 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 DEDDO75618 318 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 RPL12P30050 165 aaKnown RBP17.3■□□□□ 0.36
MSLN-205ENST00000563941 FXYD4P59646 89 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 SRSF3P84103 164 aaKnown RBP17.3■□□□□ 0.36
MSLN-205ENST00000563941 SMCO1Q147U7 214 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 ABCA11PQ4W5N1 156 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 TMEM105Q8N8V8 129 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 CPEB3Q8NE35 698 aaKnown RBP17.3■□□□□ 0.36
MSLN-205ENST00000563941 OR4A4PQ8NGN8 299 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 C1QTNF5Q9BXJ0 243 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 NAA60Q9H7X0 242 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 TAF9BQ9HBM6 251 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 KCNIP3Q9Y2W7 256 aa17.3■□□□□ 0.36
MSLN-205ENST00000563941 NOSIPQ9Y314 301 aaKnown RBP17.3■□□□□ 0.36
MSLN-205ENST00000563941 K7EPK0 472 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 GPR31O00270 319 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 TOR1AO14656 332 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 PDCD1Q15116 288 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 RAB11FIP2Q7L804 512 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 FAM71E2Q8N5Q1 922 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 SPSB4Q96A44 273 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 TECTBQ96PL2 329 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 ZPBPQ9BS86 351 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 ZNF286AQ9HBT8 521 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 PDCD6O75340 191 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 OR5AC1P0C628 307 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 RCC1P18754 421 aaPredicted RBP17.29■□□□□ 0.36
MSLN-205ENST00000563941 FCGR2CP31995 323 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 RBM11P57052 281 aaKnown RBP17.29■□□□□ 0.36
MSLN-205ENST00000563941 TMEM187Q14656 261 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 SP6Q3SY56 376 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 RTN4IP1Q8WWV3 396 aaPredicted RBP17.29■□□□□ 0.36
MSLN-205ENST00000563941 PRDM14Q9GZV8 571 aa17.29■□□□□ 0.36
MSLN-205ENST00000563941 ZNF629Q9UEG4 869 aaPredicted RBP17.29■□□□□ 0.36
MSLN-205ENST00000563941 LSM5Q9Y4Y9 91 aaKnown RBP17.29■□□□□ 0.36
MSLN-205ENST00000563941 LRP3O75074 770 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 MRPL33O75394 65 aaKnown RBP17.28■□□□□ 0.36
MSLN-205ENST00000563941 RFC3P40938 356 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 MALLQ13021 153 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 EIF5AL1Q6IS14 154 aaKnown RBP17.28■□□□□ 0.36
MSLN-205ENST00000563941 IL34Q6ZMJ4 242 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 CALHM1Q8IU99 346 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 SVBPQ8N300 66 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 SAT2Q96F10 170 aaPredicted RBP17.28■□□□□ 0.36
MSLN-205ENST00000563941 TAAR9Q96RI9 348 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 PRRX2Q99811 253 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 STRADBQ9C0K7 418 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 PCDHB16Q9NRJ7 776 aa17.28■□□□□ 0.36
MSLN-205ENST00000563941 SCGB1D2O95969 90 aa17.27■□□□□ 0.36
MSLN-205ENST00000563941 SRYQ05066 204 aa17.27■□□□□ 0.36
MSLN-205ENST00000563941 PJVKQ0ZLH3 352 aa17.27■□□□□ 0.36
MSLN-205ENST00000563941 ZNF169Q14929 603 aaPredicted RBP17.27■□□□□ 0.36
MSLN-205ENST00000563941 GUCA2BQ16661 112 aa17.27■□□□□ 0.36
MSLN-205ENST00000563941 NRN1LQ496H8 165 aa17.27■□□□□ 0.36
MSLN-205ENST00000563941 PUSL1Q8N0Z8 303 aaKnown RBP17.27■□□□□ 0.36
MSLN-205ENST00000563941 ZNF611Q8N823 705 aa17.27■□□□□ 0.36
MSLN-205ENST00000563941 GALNT14Q96FL9 552 aa17.27■□□□□ 0.36
MSLN-205ENST00000563941 SMIM8Q96KF7 97 aa17.27■□□□□ 0.36
MSLN-205ENST00000563941 PARPBPQ9NWS1 579 aa17.27■□□□□ 0.36
MSLN-205ENST00000563941 IGKV3D-15A0A087WSY6 115 aa17.27■□□□□ 0.35
MSLN-205ENST00000563941 ARF1P84077 181 aaKnown RBP17.27■□□□□ 0.35
MSLN-205ENST00000563941 PHLDA2Q53GA4 152 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms