RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 PP6455Q8WZ26 134 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 CFHR4Q92496 578 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 OAZ3Q9UMX2 235 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 TBL2Q9Y4P3 447 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 TGP01266 2768 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 SERPINA3P01011 423 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 UBCP0CG48 685 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 ZNF728P0DKX0 622 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 ZNF85Q03923 595 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 LY6EQ16553 131 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 SLC25A30Q5SVS4 291 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 Q8IYB0 196 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 OR8H2Q8N162 312 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 OR10H4Q8NGA5 316 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 MALSU1Q96EH3 234 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 SNX22Q96L94 193 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 ADI1Q9BV57 179 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 NPFFR1Q9GZQ6 430 aa13.94□□□□□ -0.18
VPS9D1-203ENST00000563798 CHST1O43916 411 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 CSF1P09603 554 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 COX7A1P24310 79 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 KIR3DL2P43630 455 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 CNN3Q15417 329 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 ODF4Q2M2E3 257 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 ZNF626Q68DY1 528 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 FDX2Q6P4F2 183 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 Q6ZTK2 550 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 UTS2BQ765I0 119 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 KCTD20Q7Z5Y7 419 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 LHFPL4Q7Z7J7 247 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 ENTHD1Q8IYW4 607 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 BATF2Q8N1L9 274 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 Q8N2B8 174 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 ASCC1Q8N9N2 400 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 OR13D1Q8NGV5 346 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 OR2T6Q8NHC8 308 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 FOXRED1Q96CU9 486 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 BORCS8Q96FH0 119 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 SIGLEC9Q9Y336 463 aa13.93□□□□□ -0.18
VPS9D1-203ENST00000563798 LOC107986453A0A1B0GWG9 222 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 TMEM82A0PJX8 343 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 E9PQ18 207 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 J3QRE1 110 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 APOL3O95236 402 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 ISG15P05161 165 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 IGHV1-8P0DP01 117 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 PAX6P26367 422 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 ATP6V1E1P36543 226 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 RBP2P50120 134 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 DYNLT3P51808 116 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 CDC42P60953 191 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 TMEM244Q5VVB8 128 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 ZNF782Q6ZMW2 699 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 SLC25A26Q70HW3 274 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 GDPD3Q7L5L3 318 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 TCF23Q7RTU1 214 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 EGFL6Q8IUX8 553 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 DYNAPQ8N1N2 210 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 SLAMF9Q96A28 289 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 RIBC2Q9H4K1 309 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 TCF19Q9Y242 345 aa13.92□□□□□ -0.18
VPS9D1-203ENST00000563798 IGKV1-9A0A0C4DH69 117 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 TRBV2A0A0J9YWF9 115 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 hADV38S2A0JD32 116 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 PIPP12273 146 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 ZNF91Q05481 1191 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 ZNF146Q15072 292 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 LDLRAD2Q5SZI1 272 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 FAM220AQ7Z4H9 259 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 OR2G2Q8NGZ5 317 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 ADAT3Q96EY9 351 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 HRASLS5Q96KN8 279 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 ZNF714Q96N38 554 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 MBOAT4Q96T53 435 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 LINC00312Q9Y6C7 94 aa13.91□□□□□ -0.18
VPS9D1-203ENST00000563798 A6NDX4 124 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 HAND1O96004 215 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 ARG1P05089 322 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 ALPLP05186 524 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 PRKACBP22694 351 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 ERP29P30040 261 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 CCR9P51686 369 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 ATP1B3P54709 279 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 EDDM3BP56851 147 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 SNRPGP62308 76 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 ACTC1P68032 377 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 ACTA1P68133 377 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 TP53I3Q53FA7 332 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 CCBE1Q6UXH8 406 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 RDH10Q8IZV5 341 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 KLHDC1Q8N7A1 406 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 OR52N4Q8NGI2 321 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 FAM110DQ8TAY7 271 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 EMG1Q92979 244 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 SPSB1Q96BD6 273 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 ZNF702PQ9H963 129 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 SERTAD4Q9NUC0 356 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 FRRS1LQ9P0K9 344 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 GNG8Q9UK08 70 aa13.9□□□□□ -0.18
VPS9D1-203ENST00000563798 FOXJ3Q9UPW0 622 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms