RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 H0YAE9 185 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 K7N7A8 449 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 M0R1W7 72 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 OGG1O15527 345 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 NXPH2O95156 264 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 PIPP12273 146 aaPredicted RBP12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 DCKP27707 260 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 CAPGP40121 348 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 GABRA2P47869 451 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 RBP2P50120 134 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 MRPL28Q13084 256 aaKnown RBP12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 CDK5R1Q15078 307 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 CNN3Q15417 329 aaKnown RBP12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 OR2G6Q5TZ20 316 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 Q6YL49 198 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 DHRSXQ8N5I4 330 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 CYGBQ8WWM9 190 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 TFAP2CQ92754 450 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 GGHQ92820 318 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 LHX4Q969G2 390 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 SPSB1Q96BD6 273 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 BORCS8Q96FH0 119 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 CEP19Q96LK0 163 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 DUX5Q96PT3 197 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 Q9H521 79 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 ZMAT3Q9HA38 289 aaKnown RBP12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 PLCXD1Q9NUJ7 323 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 CLEC2DQ9UHP7 191 aa12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 CAB39Q9Y376 341 aaPredicted RBP12.12□□□□□ -0.47
RPUSD1-204ENST00000563560 TMEM82A0PJX8 343 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 TMEM212A6NML5 194 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 TK1P04183 234 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 MELTFP08582 738 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 HKR1P10072 659 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 ZP1P60852 638 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 PDZK1IP1Q13113 114 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 BAMBIQ13145 260 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 CCDC58Q4VC31 144 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 C17orf107Q6ZR85 190 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 SLC25A26Q70HW3 274 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 LDLRAD3Q86YD5 345 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 HAVCR2Q8TDQ0 301 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 SLAMF9Q96A28 289 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 OPALINQ96PE5 141 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 FAM234AQ9H0X4 552 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 SIRT7Q9NRC8 400 aa12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 RBFOX1Q9NWB1 397 aaKnown RBP12.11□□□□□ -0.47
RPUSD1-204ENST00000563560 TRBV2A0A0J9YWF9 115 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 A0A0U1RQK1 487 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 KDM4BO94953 1096 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 SERPINA3P01011 423 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 NDUFB7P17568 137 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 BCL3P20749 454 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 KLRD1Q13241 179 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 ZNF273Q14593 569 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 ZNF146Q15072 292 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 TMEM200BQ69YZ2 307 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 RPL22L1Q6P5R6 122 aaKnown RBP12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 LHFPL2Q6ZUX7 228 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 ZNF676Q8N7Q3 588 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 SETD9Q8NE22 299 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 TMEM185AQ8NFB2 350 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 OR13C3Q8NGS6 347 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 OR13C9Q8NGT0 318 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 OR5AK2Q8NH90 309 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 GATAD2BQ8WXI9 593 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 H1FXQ92522 213 aaKnown RBP12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 MRPL48Q96GC5 212 aaKnown RBP12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 PGLYRP3Q96LB9 341 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 SPACA5Q96QH8 159 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 ZCCHC4Q9H5U6 513 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 NOX4Q9NPH5 578 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 ONECUT1Q9UBC0 465 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 PSORS1C1Q9UIG5 152 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 RAB26Q9ULW5 256 aa12.1□□□□□ -0.47
RPUSD1-204ENST00000563560 MEGF11A6BM72 1044 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 HOXA3O43365 443 aaPredicted RBP12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 SPRY1O43609 319 aaPredicted RBP12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 CCDC159P0C7I6 412 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 PRKACBP22694 351 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 GBX2P52951 348 aaPredicted RBP12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 ATP1B3P54709 279 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 AQP4P55087 323 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 COL10A1Q03692 680 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 KIAA2026Q5HYC2 2103 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 DMKNQ6E0U4 476 aaPredicted RBP12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 PNKDQ8N490 385 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 TMEM86BQ8N661 226 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 OR52N4Q8NGI2 321 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 OR51A2Q8NGJ7 313 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 OR52N1Q8NH53 320 aa12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 TAF15Q92804 592 aaKnown RBP eCLIP12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 METTL8Q9H825 291 aaKnown RBP12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 CNOT2Q9NZN8 540 aaKnown RBP12.09□□□□□ -0.47
RPUSD1-204ENST00000563560 VWFP04275 2813 aa12.08□□□□□ -0.48
RPUSD1-204ENST00000563560 TRBV5-5A0A0J9YX44 114 aa12.08□□□□□ -0.48
RPUSD1-204ENST00000563560 XPNPEP2O43895 674 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms