RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ZNF728P0DKX0 622 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 ATP6V1E1P36543 226 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 FUT6P51993 359 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 PRSS35Q8N3Z0 413 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 DTX3Q8N9I9 347 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 CFHR4Q92496 578 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 SLAMF9Q96A28 289 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 GABARAPL3Q9BY60 117 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 FOXJ3Q9UPW0 622 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 PRKDCP78527 4128 aaKnown RBP13.13□□□□□ -0.31
SNX1-213ENST00000561026 SERPINA3P01011 423 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 EDDM3BP56851 147 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 TMED1Q13445 227 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 SLC25A26Q70HW3 274 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 GDPD3Q7L5L3 318 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 EGFL6Q8IUX8 553 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 OR8H2Q8N162 312 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 DYNAPQ8N1N2 210 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 OR13D1Q8NGV5 346 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 EME1Q96AY2 570 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 C10orf35Q96D05 121 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 MALSU1Q96EH3 234 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 CENPNQ96H22 339 aaPredicted RBP13.12□□□□□ -0.31
SNX1-213ENST00000561026 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 RIBC2Q9H4K1 309 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 OAZ3Q9UMX2 235 aa13.12□□□□□ -0.31
SNX1-213ENST00000561026 TET2Q6N021 2002 aaPredicted RBP13.11□□□□□ -0.31
SNX1-213ENST00000561026 MEX3AA1L020 520 aaKnown RBP13.11□□□□□ -0.31
SNX1-213ENST00000561026 ODF3BA8MYP8 253 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 INMTO95050 263 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 ARG1P05089 322 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 RAB13P51153 203 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 ISL1P61371 349 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 ZNF85Q03923 595 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
SNX1-213ENST00000561026 C1QL4Q86Z23 238 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 RDH10Q8IZV5 341 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 KLHDC1Q8N7A1 406 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 C11orf44Q8N8P7 122 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 OR11H6Q8NGC7 330 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 PP6455Q8WZ26 134 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 RFKQ969G6 155 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 RNF166Q96A37 237 aaPredicted RBP13.11□□□□□ -0.31
SNX1-213ENST00000561026 BORCS8Q96FH0 119 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 SNX22Q96L94 193 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 OSBPL10Q9BXB5 764 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
SNX1-213ENST00000561026 GNG8Q9UK08 70 aa13.11□□□□□ -0.31
SNX1-213ENST00000561026 TBL2Q9Y4P3 447 aaKnown RBP13.11□□□□□ -0.31
SNX1-213ENST00000561026 LOC107986453A0A1B0GWG9 222 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 TMEM82A0PJX8 343 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 ATP5HO75947 161 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 UBCP0CG48 685 aaKnown RBP13.1□□□□□ -0.31
SNX1-213ENST00000561026 KIR3DL2P43630 455 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 SSX2Q16385 188 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 TP53I3Q53FA7 332 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 LDLRAD2Q5SZI1 272 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 ZNF626Q68DY1 528 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 CCBE1Q6UXH8 406 aaPredicted RBP13.1□□□□□ -0.31
SNX1-213ENST00000561026 TCF23Q7RTU1 214 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 Q8IYB0 196 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 DNAAF1Q8NEP3 725 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 FOXRED1Q96CU9 486 aaPredicted RBP13.1□□□□□ -0.31
SNX1-213ENST00000561026 NKX3-1Q99801 234 aaPredicted RBP13.1□□□□□ -0.31
SNX1-213ENST00000561026 TCF19Q9Y242 345 aa13.1□□□□□ -0.31
SNX1-213ENST00000561026 A0A0G2JK05 382 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 hADV38S2A0JD32 116 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 HAND1O96004 215 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 OPN1MWP04001 364 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 OPN1MW2P0DN77 364 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 OPN1MW3P0DN78 364 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 VSIG10L2P0DP72 767 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 RBP2P50120 134 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 CDC42P60953 191 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 EDDM3AQ14507 147 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 CNN3Q15417 329 aaKnown RBP13.09□□□□□ -0.31
SNX1-213ENST00000561026 FAM189A2Q15884 450 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 PLA1AQ53H76 456 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 HIST2H2BDQ6DRA6 164 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 FAM220AQ7Z4H9 259 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 ENTHD1Q8IYW4 607 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 Q8N2B8 174 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 OR52N4Q8NGI2 321 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 RPS4Y2Q8TD47 263 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 TRUB1Q8WWH5 349 aaKnown RBP13.09□□□□□ -0.31
SNX1-213ENST00000561026 EMG1Q92979 244 aaKnown RBP13.09□□□□□ -0.31
SNX1-213ENST00000561026 ADAT3Q96EY9 351 aaPredicted RBP13.09□□□□□ -0.31
SNX1-213ENST00000561026 ZNF714Q96N38 554 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 ZNF702PQ9H963 129 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 IL36RNQ9UBH0 155 aa13.09□□□□□ -0.31
SNX1-213ENST00000561026 IGKV1-9A0A0C4DH69 117 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 TRBV2A0A0J9YWF9 115 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 A6NDX4 124 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 IGHA1P01876 353 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 NPBWR2P48146 333 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 ATP1B3P54709 279 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 DYNC1I2Q13409 638 aaKnown RBP13.08□□□□□ -0.31
SNX1-213ENST00000561026 TMEM244Q5VVB8 128 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 KCTD20Q7Z5Y7 419 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms