RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 RPS27P42677 84 aaKnown RBP11.3□□□□□ -0.6
SMAD3-214ENST00000560402 TPTEP56180 551 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 CAV3P56539 151 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 NANOS3P60323 173 aaKnown RBP11.3□□□□□ -0.6
SMAD3-214ENST00000560402 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMAD3-214ENST00000560402 GRB2P62993 217 aaKnown RBP11.3□□□□□ -0.6
SMAD3-214ENST00000560402 INSL4Q14641 139 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 WDR38Q5JTN6 314 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 GPR157Q5UAW9 335 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 TRIQKQ629K1 86 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 WDR25Q64LD2 544 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-214ENST00000560402 PGAP1Q75T13 922 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 MRPL21Q7Z2W9 205 aaKnown RBP11.3□□□□□ -0.6
SMAD3-214ENST00000560402 LYSMD2Q8IV50 215 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 LINC00346Q8IVM7 164 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 POC5Q8NA72 575 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 PLPP7Q8NBV4 271 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 OR13C5Q8NGS8 318 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 RNF133Q8WVZ7 376 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 SPTSSAQ969W0 71 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 SLAMF6Q96DU3 332 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 PRDM13Q9H4Q3 707 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 OPA3Q9H6K4 179 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 FN3KRPQ9HA64 309 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 CENPMQ9NSP4 180 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 HHLA2Q9UM44 414 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 MMP24Q9Y5R2 645 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 TMEM269A0A1B0GVZ9 245 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 ACOD1A6NK06 481 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 F5H5K5 113 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 M0R135 149 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 HPGDSO60760 199 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 ZNF205O95201 554 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 PTBP3O95758 552 aaKnown RBP11.29□□□□□ -0.6
SMAD3-214ENST00000560402 LCATP04180 440 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 SCAND1P57086 179 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 PITPNAQ00169 270 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 MAB21L1Q13394 359 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 IL18Q14116 193 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 RSPO1Q2MKA7 263 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-214ENST00000560402 FAM27D1Q5T7N8 215 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 CD276Q5ZPR3 534 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 CNIH2Q6PI25 160 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 SPATC1Q76KD6 591 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 CATSPERDQ86XM0 798 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 SAMD12Q8N8I0 201 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 TRMT10AQ8TBZ6 339 aaKnown RBP11.29□□□□□ -0.6
SMAD3-214ENST00000560402 PPP1R14BQ96C90 147 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 ZNF799Q96GE5 643 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 MAP6Q96JE9 813 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 ADAT1Q9BUB4 502 aaKnown RBP11.29□□□□□ -0.6
SMAD3-214ENST00000560402 SRRQ9GZT4 340 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 MIXL1Q9H2W2 232 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 PNRC2Q9NPJ4 139 aaKnown RBP11.29□□□□□ -0.6
SMAD3-214ENST00000560402 V9GY05 133 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 V9GYH0 126 aa11.29□□□□□ -0.6
SMAD3-214ENST00000560402 hCG_2014768A0A024R1R8 64 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 MEGF11A6BM72 1044 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 AIPO00170 330 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 P2RY10O00398 339 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 NDUFA2O43678 99 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 GMDSO60547 372 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 ISG15P05161 165 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 LIPFP07098 398 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-214ENST00000560402 PMELP40967 661 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 SOX2P48431 317 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 CAPZA1P52907 286 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 PSMA6P60900 246 aaKnown RBP11.28□□□□□ -0.6
SMAD3-214ENST00000560402 MZT1Q08AG7 82 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 OXA1LQ15070 435 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 OR8G1Q15617 311 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 C11orf91Q3C1V1 193 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 STEAP3Q658P3 488 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 TMEM86BQ8N661 226 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 SPERTQ8NA61 448 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 C19orf18Q8NEA5 215 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 C15orf40Q8WUR7 153 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 TMEM106AQ96A25 262 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 AMELYQ99218 206 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 BRD7Q9NPI1 651 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 MRPL15Q9P015 296 aaKnown RBP11.28□□□□□ -0.6
SMAD3-214ENST00000560402 RNF7Q9UBF6 113 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 EXTL2Q9UBQ6 330 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 OR52A1Q9UKL2 312 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 ETV7Q9Y603 341 aa11.28□□□□□ -0.6
SMAD3-214ENST00000560402 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 TRBV5-7A0A0A0MS05 114 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 IGHV3-64DA0A0J9YX35 117 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 A0A1B0GVI7 797 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 A0A1W2PPK0 400 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 SHISA3A0PJX4 238 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 CD300LBA8K4G0 201 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 SRRM5B3KS81 715 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 LGALS8O00214 317 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 CALCBP10092 127 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 SLC2A2P11168 524 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-214ENST00000560402 AZGP1P25311 298 aaKnown RBP11.27□□□□□ -0.61
SMAD3-214ENST00000560402 KIR3DL2P43630 455 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 RPL15P61313 204 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms