RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CTDSP2O14595 271 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 PDCD5O14737 125 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 TPD52L2O43399 206 aaKnown RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 HPGDSO60760 199 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 MPIG6BO95866 241 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 CYB5R3P00387 301 aaPredicted RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 IL1AP01583 271 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 RAF1P04049 648 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 EIF4EP06730 217 aaKnown RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 SFTPBP07988 381 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DUX4L2P0CJ85 424 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DUX4L3P0CJ86 424 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DUX4L4P0CJ87 422 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DUX4L5P0CJ88 424 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DUX4L6P0CJ89 424 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DUX4L7P0CJ90 424 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 TMEM225BP0DP42 221 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 PTHLHP12272 177 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 SERPINA2P20848 420 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 SNRPD2P62316 118 aaKnown RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 EFNB3Q15768 340 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 PIGYQ3MUY2 71 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 RNASE12Q5GAN4 147 aaKnown RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 C1QTNF12Q5T7M4 302 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 GLT8D1Q68CQ7 371 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 AWAT2Q6E213 333 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 FAM166AQ6J272 317 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DUX4L9Q6RFH8 374 aaPredicted RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 PAMR1Q6UXH9 720 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 UNQ6126/PRO20091Q6UXV3 157 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 LHFPL2Q6ZUX7 228 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 FGFRL1Q8N441 504 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 ZNF611Q8N823 705 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 NKAIN3Q8N8D7 197 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 SCCPDHQ8NBX0 429 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 AQP3Q92482 292 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 PHYHIPQ92561 330 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DYRK2Q92630 601 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 GCDHQ92947 438 aaPredicted RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 YIPF5Q969M3 257 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 SLC25A38Q96DW6 304 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 VRK1Q99986 396 aaPredicted RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 MICU1Q9BPX6 476 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 BCL7BQ9BQE9 202 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 RTL8AQ9BWD3 113 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 C6orf62Q9GZU0 229 aaPredicted RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 CXXC4Q9H2H0 198 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 OR51I2Q9H344 312 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 BARX1Q9HBU1 254 aaPredicted RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 ABCB9Q9NP78 766 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 MTCH1Q9NZJ7 389 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 COMMD3Q9UBI1 195 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DUX4Q9UBX2 424 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 STEAP1Q9UHE8 339 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 ELF5Q9UKW6 265 aaPredicted RBP4.39□□□□□ -1.71
SPG11-220ENST00000559933 ING4Q9UNL4 249 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 SLC7A11Q9UPY5 501 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 PLEKHA6Q9Y2H5 1048 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 MPC1Q9Y5U8 109 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 USF3Q68DE3 2245 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 TANC2Q9HCD6 1990 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 TRAV20A0A0B4J274 112 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 A0A1B0GWJ7 208 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 LRP5LA4QPB2 252 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 B9A039 149 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.38□□□□□ -1.71
SPG11-220ENST00000559933 J3QT63 122 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 ZNF701M0R085 212 aaPredicted RBP4.38□□□□□ -1.71
SPG11-220ENST00000559933 HSPB6O14558 160 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 MAGEB3O15480 346 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 RGS5O15539 181 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 CRTAPO75718 401 aaPredicted RBP4.38□□□□□ -1.71
SPG11-220ENST00000559933 PTBP3O95758 552 aaKnown RBP4.38□□□□□ -1.71
SPG11-220ENST00000559933 SELLP14151 372 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 PRKACBP22694 351 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 PAX7P23759 505 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 COL8A2P25067 703 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 HTR2CP28335 458 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 DUSP1P28562 367 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 PEX19P40855 299 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 CD200P41217 278 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 PTGFRP43088 359 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 RBP2P50120 134 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 RORCP51449 518 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 BMXP51813 675 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 FUT6P51993 359 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 ATP1B3P54709 279 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 SELENOVP59797 346 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 GNG3P63215 75 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 QRFPP83859 136 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 PDZK1IP1Q13113 114 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 CARTPTQ16568 116 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 C2orf76Q3KRA6 126 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 MOGAT2Q3SYC2 334 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 ZNF404Q494X3 552 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 SLC22A6Q4U2R8 563 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 C1orf100Q5SVJ3 147 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 AVPI1Q5T686 147 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms