RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 IL36RNQ9UBH0 155 aa8.79□□□□□ -1
TPM1-221ENST00000559831 EXTL2Q9UBQ6 330 aa8.79□□□□□ -1
TPM1-221ENST00000559831 OR14J1Q9UGF5 321 aa8.79□□□□□ -1
TPM1-221ENST00000559831 UTP20O75691 2785 aaKnown RBP8.78□□□□□ -1
TPM1-221ENST00000559831 A0A0A6YYD4 124 aa8.78□□□□□ -1
TPM1-221ENST00000559831 METTL21EPA6NDL7 271 aa8.78□□□□□ -1
TPM1-221ENST00000559831 SRRM5B3KS81 715 aa8.78□□□□□ -1
TPM1-221ENST00000559831 OVOL3O00110 214 aa8.78□□□□□ -1
TPM1-221ENST00000559831 NOS1APO75052 506 aaPredicted RBP8.78□□□□□ -1
TPM1-221ENST00000559831 NDUFS7O75251 213 aa8.78□□□□□ -1
TPM1-221ENST00000559831 APOA1P02647 267 aa8.78□□□□□ -1
TPM1-221ENST00000559831 DAOP14920 347 aa8.78□□□□□ -1
TPM1-221ENST00000559831 COL8A2P25067 703 aa8.78□□□□□ -1
TPM1-221ENST00000559831 DUSP1P28562 367 aa8.78□□□□□ -1
TPM1-221ENST00000559831 TNFSF8P32971 234 aa8.78□□□□□ -1
TPM1-221ENST00000559831 PITPNBP48739 271 aa8.78□□□□□ -1
TPM1-221ENST00000559831 VEGFCP49767 419 aa8.78□□□□□ -1
TPM1-221ENST00000559831 RBM11P57052 281 aaKnown RBP8.78□□□□□ -1
TPM1-221ENST00000559831 FGF12P61328 243 aa8.78□□□□□ -1
TPM1-221ENST00000559831 ERVK11-1P61568 191 aa8.78□□□□□ -1
TPM1-221ENST00000559831 RPS27AP62979 156 aaKnown RBP8.78□□□□□ -1
TPM1-221ENST00000559831 PDCD1Q15116 288 aa8.78□□□□□ -1
TPM1-221ENST00000559831 TAF9Q16594 264 aa8.78□□□□□ -1
TPM1-221ENST00000559831 HFEQ30201 348 aa8.78□□□□□ -1
TPM1-221ENST00000559831 SMIM21Q3B7S5 101 aa8.78□□□□□ -1
TPM1-221ENST00000559831 SFRP4Q6FHJ7 346 aaPredicted RBP8.78□□□□□ -1
TPM1-221ENST00000559831 ELP2Q6IA86 826 aa8.78□□□□□ -1
TPM1-221ENST00000559831 CNIH2Q6PI25 160 aa8.78□□□□□ -1
TPM1-221ENST00000559831 ACP7Q6ZNF0 438 aa8.78□□□□□ -1
TPM1-221ENST00000559831 BIVMQ86UB2 503 aa8.78□□□□□ -1
TPM1-221ENST00000559831 LRRC28Q86X40 367 aaPredicted RBP8.78□□□□□ -1
TPM1-221ENST00000559831 C1orf87Q8N0U7 546 aa8.78□□□□□ -1
TPM1-221ENST00000559831 GCSAMQ8N6F7 178 aa8.78□□□□□ -1
TPM1-221ENST00000559831 OR4M1Q8NGD0 313 aa8.78□□□□□ -1
TPM1-221ENST00000559831 RAB40AQ8WXH6 277 aa8.78□□□□□ -1
TPM1-221ENST00000559831 RDH5Q92781 318 aa8.78□□□□□ -1
TPM1-221ENST00000559831 YIPF5Q969M3 257 aa8.78□□□□□ -1
TPM1-221ENST00000559831 PTX4Q96A99 478 aa8.78□□□□□ -1
TPM1-221ENST00000559831 PHF21AQ96BD5 680 aa8.78□□□□□ -1
TPM1-221ENST00000559831 S100A16Q96FQ6 103 aaKnown RBP8.78□□□□□ -1
TPM1-221ENST00000559831 Q96M66 194 aa8.78□□□□□ -1
TPM1-221ENST00000559831 CMTM3Q96MX0 182 aa8.78□□□□□ -1
TPM1-221ENST00000559831 LPAR5Q9H1C0 372 aa8.78□□□□□ -1
TPM1-221ENST00000559831 RHOFQ9HBH0 211 aa8.78□□□□□ -1
TPM1-221ENST00000559831 HMG20AQ9NP66 347 aa8.78□□□□□ -1
TPM1-221ENST00000559831 TMEM106BQ9NUM4 274 aa8.78□□□□□ -1
TPM1-221ENST00000559831 DNAJB11Q9UBS4 358 aa8.78□□□□□ -1
TPM1-221ENST00000559831 FBLN5Q9UBX5 448 aa8.78□□□□□ -1
TPM1-221ENST00000559831 ST3GAL6Q9Y274 331 aa8.78□□□□□ -1
TPM1-221ENST00000559831 PLEKHA6Q9Y2H5 1048 aa8.78□□□□□ -1
TPM1-221ENST00000559831 NPTNQ9Y639 398 aa8.78□□□□□ -1
TPM1-221ENST00000559831 FASNP49327 2511 aaKnown RBP8.77□□□□□ -1.01
TPM1-221ENST00000559831 GCN1Q92616 2671 aaKnown RBP8.77□□□□□ -1.01
TPM1-221ENST00000559831 TMEM178BH3BS89 294 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 IFNL4K9M1U5 179 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 GEMIN2O14893 280 aaKnown RBP8.77□□□□□ -1.01
TPM1-221ENST00000559831 LHBP01229 141 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 ACAA1P09110 424 aaPredicted RBP8.77□□□□□ -1.01
TPM1-221ENST00000559831 CPT2P23786 658 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 CDK2P24941 298 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 TALDO1P37837 337 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 CEBPDP49716 269 aaPredicted RBP8.77□□□□□ -1.01
TPM1-221ENST00000559831 EFNA4P52798 201 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 SCN1BQ07699 218 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 IKZF1Q13422 519 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 ZNF181Q2M3W8 571 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 MOGAT2Q3SYC2 334 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 NKAPLQ5M9Q1 402 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 CDH24Q86UP0 819 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 CHST4Q8NCG5 386 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 DEFB108BQ8NET1 73 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 IGFBPL1Q8WX77 278 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 MRPS24Q96EL2 167 aaKnown RBP8.77□□□□□ -1.01
TPM1-221ENST00000559831 WDFY2Q96P53 400 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 TSC22D3Q99576 134 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 TM2D1Q9BX74 207 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 ABCG5Q9H222 651 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 HES4Q9HCC6 221 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 DIABLOQ9NR28 239 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 RASL12Q9NYN1 266 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 ZNF581Q9P0T4 197 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 NLKQ9UBE8 527 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 COL12A1Q99715 3063 aa8.77□□□□□ -1.01
TPM1-221ENST00000559831 TRAV18A0A075B6X5 111 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 PPIAL4EA0A075B759 164 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 OOEPA6NGQ2 149 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 CLDN25C9JDP6 229 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 PPIAL4DF5H284 164 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.76□□□□□ -1.01
TPM1-221ENST00000559831 SIRPB1O00241 398 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 SOCS1O15524 211 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 OR7C1O76099 320 aaPredicted RBP8.76□□□□□ -1.01
TPM1-221ENST00000559831 F12P00748 615 aaPredicted RBP8.76□□□□□ -1.01
TPM1-221ENST00000559831 KNG1P01042 644 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 IGHV4-39P01824 125 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 TFF1P04155 84 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 PPIAL4FP0DN26 164 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 ZNF44P15621 663 aa8.76□□□□□ -1.01
TPM1-221ENST00000559831 BLVRBP30043 206 aaPredicted RBP8.76□□□□□ -1.01
TPM1-221ENST00000559831 CFHR2P36980 270 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms