RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 IGHV1-69P01742 117 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 MT-ND2P03891 347 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 TK1P04183 234 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 SFTPBP07988 381 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 IGHV4-38-2P0DP08 117 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 TMEM225BP0DP42 221 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 PIPP12273 146 aaPredicted RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 MMP9P14780 707 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 ATF1P18846 271 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 RAB3AP20336 220 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 GABRR1P24046 479 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 PRTN3P24158 256 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 AZGP1P25311 298 aaKnown RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 KIR3DL2P43630 455 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 HSPA13P48723 471 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 BMXP51813 675 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 EDDM3BP56851 147 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 ERVK11-1P61568 191 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 ELF3P78545 371 aaPredicted RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 ADARB1P78563 741 aaKnown RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 SRSF2Q01130 221 aaKnown RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 COL10A1Q03692 680 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 ST3GAL4Q11206 333 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 FOXL1Q12952 345 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 PDZK1IP1Q13113 114 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 KISS1Q15726 138 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 SMN1Q16637 294 aaKnown RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 DGUOKQ16854 277 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 KRTAP24-1Q3LI83 254 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 KLF17Q5JT82 389 aaPredicted RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 SPIN3Q5JUX0 258 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 METAP1DQ6UB28 335 aaPredicted RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 C12orf54Q6X4T0 127 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 BRD3OSQ6XYD6 125 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 VMO1Q7Z5L0 202 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 FAM185AQ8N0U4 392 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 FAM58AQ8N1B3 248 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 PARP16Q8N5Y8 322 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 SIGLECL1Q8N7X8 197 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 ASCC1Q8N9N2 400 aaKnown RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 LY6G5BQ8NDX9 201 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 BPIFB6Q8NFQ5 453 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 OR13C9Q8NGT0 318 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 OR52N1Q8NH53 320 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 C8orf46Q8TAG6 207 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 SSMEM1Q8WWF3 244 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 THRSPQ92748 146 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 TFAP2CQ92754 450 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 LHX4Q969G2 390 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 MYDGFQ969H8 173 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 TMEM106AQ96A25 262 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 SLAMF9Q96A28 289 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 DACT3Q96B18 629 aaPredicted RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 SMIM19Q96E16 107 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 ADAT3Q96EY9 351 aaPredicted RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 SDSLQ96GA7 329 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 GAFA1Q96PS6 74 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 GPER1Q99527 375 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 PDCD1LG2Q9BQ51 273 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 FGF23Q9GZV9 251 aaPredicted RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 DPAGT1Q9H3H5 408 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 HES4Q9HCC6 221 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 FGF20Q9NP95 211 aaPredicted RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 TMEM138Q9NPI0 162 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 PCDHB16Q9NRJ7 776 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 PAK1IP1Q9NWT1 392 aaPredicted RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 SCN3BQ9NY72 215 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 MTCH1Q9NZJ7 389 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 ZNF69Q9UC07 566 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 ZNF281Q9Y2X9 895 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 SF3B6Q9Y3B4 125 aaKnown RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 MXRA5Q9NR99 2828 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 FBN1P35555 2871 aaKnown RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 TANC2Q9HCD6 1990 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 IGKV1-27A0A075B6S5 117 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 IGKV1-9A0A0C4DH69 117 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 CENPVL3A0A0U1RRI6 287 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 A0A1B0GW55 424 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 hADV38S2A0JD32 116 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DNAJC9-AS1A6NH13 148 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 PTGES3LE9PB15 166 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 E9PI62 339 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 H3BUI4 141 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 K7N7A8 449 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 HOXA3O43365 443 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 ZNF780AO75290 641 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 HAND1O96004 215 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 CSTBP04080 98 aaKnown RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 RNASE1P07998 156 aaKnown RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 FBP1P09467 338 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 GNAO1P09471 354 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DUX4L2P0CJ85 424 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DUX4L3P0CJ86 424 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DUX4L4P0CJ87 422 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DUX4L5P0CJ88 424 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DUX4L6P0CJ89 424 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DUX4L7P0CJ90 424 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 LIMS3P0CW19 117 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 LIMS4P0CW20 117 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 SELLP14151 372 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms