RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 RFPL4AL1F8VTS6 287 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 ADAM20O43506 726 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 NDUFA2O43678 99 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 CSTBP04080 98 aaKnown RBP17.77■□□□□ 0.43
CASC4-204ENST00000557945 TFF1P04155 84 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 PSG2P11465 335 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 IL2RGP31785 369 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 TGFBR1P36897 503 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 GABRA2P47869 451 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 MXD1Q05195 221 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 SLC22A6Q4U2R8 563 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 C1orf100Q5SVJ3 147 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 STUMQ69YW2 141 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 LYPD2Q6UXB3 125 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 ASCL4Q6XD76 172 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 TPRA1Q86W33 373 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 ANKRD13BQ86YJ7 626 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 CCL13Q99616 98 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 NAA50Q9GZZ1 169 aaKnown RBP17.77■□□□□ 0.43
CASC4-204ENST00000557945 PATZ1Q9HBE1 687 aaKnown RBP17.77■□□□□ 0.43
CASC4-204ENST00000557945 RHOFQ9HBH0 211 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 MIOXQ9UGB7 285 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 NKX6-3A6NJ46 265 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 KNG1P01042 644 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 IGHV2-5P01817 119 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 SERPINA2P20848 420 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 HTR2CP28335 458 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 LMO4P61968 165 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 RAB11BQ15907 218 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 OR6M1Q8NGM8 313 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 ANGPTL6Q8NI99 470 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 HMG20AQ9NP66 347 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 PCDHB16Q9NRJ7 776 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 IL36RNQ9UBH0 155 aa17.76■□□□□ 0.43
CASC4-204ENST00000557945 IGKV1D-17A0A075B6S4 117 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 SLC17A2O00624 439 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 SLC22A1O15245 554 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 TMPRSS2O15393 492 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 ZNF780AO75290 641 aaPredicted RBP17.75■□□□□ 0.43
CASC4-204ENST00000557945 CD37P11049 281 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 DUSP1P28562 367 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 CEBPDP49716 269 aaPredicted RBP17.75■□□□□ 0.43
CASC4-204ENST00000557945 BMXP51813 675 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 P2RY14Q15391 338 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 HES5Q5TA89 166 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 SLC16A12Q6ZSM3 486 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 NLRC3Q7RTR2 1065 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 CLVS1Q8IUQ0 354 aaPredicted RBP17.75■□□□□ 0.43
CASC4-204ENST00000557945 OR8B3Q8NGG8 313 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 TBC1D15Q8TC07 691 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 NEIL1Q96FI4 390 aaPredicted RBP17.75■□□□□ 0.43
CASC4-204ENST00000557945 OR8B2Q96RD0 313 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 IL36GQ9NZH8 169 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 AKAP9Q99996 3911 aa17.75■□□□□ 0.43
CASC4-204ENST00000557945 VPS13CQ709C8 3753 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 TNFRSF13BO14836 293 aaPredicted RBP17.74■□□□□ 0.43
CASC4-204ENST00000557945 WNT2P09544 360 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 CLEC2LP0C7M8 214 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 PRDX2P32119 198 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 FGF12P61328 243 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 VBP1P61758 197 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 NCS1P62166 190 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 GPR176Q14439 515 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 ELP2Q6IA86 826 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 SLC36A1Q7Z2H8 476 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 FAM216BQ8N7L0 139 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 COX4I2Q96KJ9 171 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 GHRLQ9UBU3 117 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 GLS2Q9UI32 602 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 OTOGQ6ZRI0 2925 aa17.74■□□□□ 0.43
CASC4-204ENST00000557945 A0A1B0GW55 424 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 A0A1W2PP11 408 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 IFITM5A6NNB3 132 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 GABARAPO95166 117 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 UBBP0CG47 229 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 DUX4L2P0CJ85 424 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 DUX4L3P0CJ86 424 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 DUX4L4P0CJ87 422 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 DUX4L5P0CJ88 424 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 DUX4L6P0CJ89 424 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 DUX4L7P0CJ90 424 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 AMY2BP19961 511 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 CAV3P56539 151 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 CLDN12P56749 244 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 IKZF1Q13422 519 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 DGUOKQ16854 277 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 ATPAF1Q5TC12 328 aaPredicted RBP17.73■□□□□ 0.43
CASC4-204ENST00000557945 DUX4L9Q6RFH8 374 aaPredicted RBP17.73■□□□□ 0.43
CASC4-204ENST00000557945 NR2C2APQ86WQ0 139 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 OSR2Q8N2R0 312 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 CD177Q8N6Q3 437 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 CTSZQ9UBR2 303 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 DUX4Q9UBX2 424 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 STEAP1Q9UHE8 339 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 ZNF222Q9UK12 451 aa17.73■□□□□ 0.43
CASC4-204ENST00000557945 MED13LQ71F56 2210 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 NOTOA8MTQ0 251 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 F5H0A9 414 aaPredicted RBP17.72■□□□□ 0.43
CASC4-204ENST00000557945 CRTAPO75718 401 aaPredicted RBP17.72■□□□□ 0.43
CASC4-204ENST00000557945 HAND1O96004 215 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms