RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 F10P00742 488 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 RPS23P62266 143 aaKnown RBP10.76□□□□□ -0.69
LDLR-205ENST00000557933 ZNF239Q16600 458 aaKnown RBP10.76□□□□□ -0.69
LDLR-205ENST00000557933 SPNS3Q6ZMD2 512 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 SKA3Q8IX90 412 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 ZNF561Q8N587 486 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 EMG1Q92979 244 aaKnown RBP10.76□□□□□ -0.69
LDLR-205ENST00000557933 NAT6Q93015 286 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 MRPL13Q9BYD1 178 aaKnown RBP10.76□□□□□ -0.69
LDLR-205ENST00000557933 FSCN3Q9NQT6 498 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 PARP11Q9NR21 331 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 FAM212BQ9NTI7 297 aaPredicted RBP10.76□□□□□ -0.69
LDLR-205ENST00000557933 P4HTMQ9NXG6 502 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 TRIOBPQ9H2D6 2365 aa10.76□□□□□ -0.69
LDLR-205ENST00000557933 CXorf65A6NEN9 183 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 IFITM10A6NMD0 228 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 IGHMP01871 453 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 IFI6P09912 130 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 AGAP20933 346 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 DUSP1P28562 367 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 FASLGP48023 281 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 C17orf67Q0P5P2 114 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 SPIN3Q5JUX0 258 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 ZNF468Q5VIY5 522 aaPredicted RBP10.75□□□□□ -0.69
LDLR-205ENST00000557933 MR1Q95460 341 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 ZDHHC12Q96GR4 267 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 GGACTQ9BVM4 153 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 MMACHCQ9Y4U1 282 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 KPTNQ9Y664 436 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 ZDBF2Q9HCK1 2354 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 TGIF2-C20orf24A0A0A6YYL0 155 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 CXCL1P09341 107 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 SMIM6P0DI80 62 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 TBPP20226 339 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 MPZP25189 248 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 APOBEC1P41238 236 aaKnown RBP10.75□□□□□ -0.69
LDLR-205ENST00000557933 TAS2R46P59540 309 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 PYY3Q5JQD4 70 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 OR2B11Q5JQS5 317 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 DEGS2Q6QHC5 323 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 TMEM123Q8N131 208 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 UBALD1Q8TB05 177 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 GPR27Q9NS67 375 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 DOCK11Q5JSL3 2073 aa10.75□□□□□ -0.69
LDLR-205ENST00000557933 A0A1W2PQD3 144 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 ANKUB1A6NFN9 424 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SSSCA1O60232 199 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 HEXBP07686 556 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 CD38P28907 300 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SLC35A1P78382 337 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 IGFBP7Q16270 282 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SOHLH1Q5JUK2 328 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 NSUN5P2Q63ZY6 315 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 PAPOLGQ9BWT3 736 aaKnown RBP10.74□□□□□ -0.69
LDLR-205ENST00000557933 IGKV1-27A0A075B6S5 117 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 RNF224P0DH78 156 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 ZNF728P0DKX0 622 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 RSU1Q15404 277 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 C9orf135Q5VTT2 229 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 OR10D4PQ8NGN7 298 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 TP53RKQ96S44 253 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SCRT1Q9BWW7 348 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 GPR61Q9BZJ8 451 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SLC2A9Q9NRM0 540 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SDHAF3Q9NRP4 125 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 ANXA10Q9UJ72 324 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SLC7A11Q9UPY5 501 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SPENQ96T58 3664 aaKnown RBP10.74□□□□□ -0.69
LDLR-205ENST00000557933 PRR14LQ5THK1 2151 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 DOCK10Q96BY6 2186 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 A0A1B0GX78 115 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 FIGNL2A6NMB9 653 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 EPHA1P21709 976 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 HOXA6P31267 233 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 CXorf66Q5JRM2 361 aaPredicted RBP10.74□□□□□ -0.69
LDLR-205ENST00000557933 THEM4Q5T1C6 240 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 FBXL14Q8N1E6 418 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 ZNF441Q8N8Z8 693 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 ZNF383Q8NA42 475 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 SUMF2Q8NBJ7 301 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 OR2G3Q8NGZ4 309 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 MAFAQ8NHW3 353 aaPredicted RBP10.74□□□□□ -0.69
LDLR-205ENST00000557933 RNF122Q9H9V4 155 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 ALKBH4Q9NXW9 302 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 LUZP4Q9P127 313 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 DNAJB11Q9UBS4 358 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 STARD10Q9Y365 291 aa10.74□□□□□ -0.69
LDLR-205ENST00000557933 GPR179Q6PRD1 2367 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 IGHV1OR21-1A0A087WYE8 117 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 IGHV3-64DA0A0J9YX35 117 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 NKX2-6A6NCS4 301 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 AP4M1O00189 453 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 CSNK1A1P48729 337 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 ZNF84P51523 738 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 DCAF7P61962 342 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 RSPO1Q2MKA7 263 aaPredicted RBP10.73□□□□□ -0.69
LDLR-205ENST00000557933 PLPPR5Q32ZL2 321 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 DOK3Q7L591 496 aa10.73□□□□□ -0.69
LDLR-205ENST00000557933 CYB561D1Q8N8Q1 229 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms