RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TRUB1Q8WWH5 349 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 IL1F10Q8WWZ1 152 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ACOT11Q8WXI4 607 aaPredicted RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 CDS1Q92903 461 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 RAB8BQ92930 207 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TCEAL3Q969E4 200 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 SLC38A4Q969I6 547 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 DTNBP1Q96EV8 351 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 RMND5BQ96G75 393 aaPredicted RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 TPD52L3Q96J77 140 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 GPX7Q96SL4 187 aaPredicted RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 MBOAT4Q96T53 435 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 APOL4Q9BPW4 351 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TMEM43Q9BTV4 400 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 PRRG3Q9BZD7 231 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 SLC7A5P2Q9GIP4 190 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 FAM192AQ9GZU8 254 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 COMMD4Q9H0A8 199 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 CCNB1IP1Q9NPC3 277 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 UBQLN4Q9NRR5 601 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 PDP1Q9P0J1 537 aaPredicted RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 DHCR7Q9UBM7 475 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 CTSFQ9UBX1 484 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 BLOC1S6Q9UL45 172 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TMCC3Q9ULS5 477 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 PPIAL4AQ9Y536 164 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 KCNE3Q9Y6H6 103 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 CLCA3PQ9Y6N3 262 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 CHD3Q12873 2000 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 COL6A6A6NMZ7 2263 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 DCHS1Q96JQ0 3298 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 PLCE1Q9P212 2302 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 FREM2Q5SZK8 3169 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 LOC400499M0QZD8 3231 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 A0A087WUJ7 227 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 A0A087WUU8 490 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 A0A087WXM4 84 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 IGHV1-45A0A0A0MS14 117 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 LOC100130705A0A1B0GUX0 176 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SMIM31A0A1B0GVY4 71 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 E9PLD3 99 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 hCG_2039718K7EN88 272 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 ABCD4O14678 606 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 BCKDKO14874 412 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 ZNF264O43296 627 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 FADS1O60427 444 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 CDC40O60508 579 aaKnown RBP eCLIP2.34□□□□□ -2.03
VRK1-207ENST00000557352 TPST2O60704 377 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 UTS2O95399 124 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SNAP29O95721 258 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 IGKV1D-16P01601 117 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 IFNA16P05015 189 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 HEXBP07686 556 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 PNMTP11086 282 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 COX6A1P12074 109 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 PIPP12273 146 aaPredicted RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 TNNI3P19429 210 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 CRHBPP24387 322 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 HTR2AP28223 471 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 GABRA3P34903 492 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 GGT2P36268 569 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 OMPP47874 163 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 OR1E2P47887 323 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 ERFP50548 548 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 DAPP51397 102 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 EMP2P54851 167 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 UGT2B15P54855 530 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SH3BGRP55822 239 aaPredicted RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 TAS2R41P59536 307 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 CDC42P60953 191 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SNRPGP62308 76 aaKnown RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 CDK5Q00535 292 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 IL1RL1Q01638 556 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SPIBQ01892 262 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 HSF2Q03933 536 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 PRKCDQ05655 676 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 SKP2Q13309 424 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 TMED1Q13445 227 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 GANABQ14697 944 aaKnown RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 SF3A2Q15428 464 aaKnown RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 MAPK14Q16539 360 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 EXOC3L2Q2M3D2 409 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 PDZK1Q5T2W1 519 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 C6orf52Q5T4I8 152 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 C12orf73Q69YU5 71 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 OR8G2PQ6IF36 304 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 ULK3Q6PHR2 472 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 TBPL2Q6SJ96 375 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 OPN5Q6U736 354 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 HSDL2Q6YN16 418 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 MBOAT2Q6ZWT7 520 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 NDUFAF7Q7L592 441 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 GALNT10Q86SR1 603 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 COMTD1Q86VU5 262 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 VRK2Q86Y07 508 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 BPIFB2Q8N4F0 458 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 ARIH2OSQ8N7S6 290 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 ZSCAN4Q8NAM6 433 aaPredicted RBP2.34□□□□□ -2.03
VRK1-207ENST00000557352 OR4K5Q8NGD3 323 aa2.34□□□□□ -2.03
VRK1-207ENST00000557352 OR4D11Q8NGI4 311 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms