RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.14□□□□□ -1.75
ATXN3-247ENST00000557311 GPR173Q9NS66 373 aa4.14□□□□□ -1.75
ATXN3-247ENST00000557311 SLC7A10Q9NS82 523 aa4.14□□□□□ -1.75
ATXN3-247ENST00000557311 SIRT3Q9NTG7 399 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-247ENST00000557311 TMEM45AQ9NWC5 275 aa4.14□□□□□ -1.75
ATXN3-247ENST00000557311 CALML5Q9NZT1 146 aa4.14□□□□□ -1.75
ATXN3-247ENST00000557311 KCNG2Q9UJ96 466 aa4.14□□□□□ -1.75
ATXN3-247ENST00000557311 SLC7A11Q9UPY5 501 aa4.14□□□□□ -1.75
ATXN3-247ENST00000557311 TRAPPC4Q9Y296 219 aa4.14□□□□□ -1.75
ATXN3-247ENST00000557311 FBXO7Q9Y3I1 522 aa4.14□□□□□ -1.75
ATXN3-247ENST00000557311 SPIN1Q9Y657 262 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-247ENST00000557311 TGP01266 2768 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 PRSS51A0A1B0GVH4 220 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 A0A1B0GW15 77 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 C20orf202A1L168 122 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 HELTA6NFD8 242 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 PTGES3LE9PB15 166 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 TEX46H3BTG2 121 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 AP4M1O00189 453 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 SLC33A1O00400 549 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 PIP5K1BO14986 540 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ANKRD28O15084 1053 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF264O43296 627 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 PLPP2O43688 288 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 XPNPEP2O43895 674 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 MRPS14O60783 128 aaKnown RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 SCGB2A1O75556 95 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 KDM4BO94953 1096 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 NXPH3O95157 252 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 GABARAPO95166 117 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 PMS2P2O95744 297 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 MT-ATP6P00846 226 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 CRYBA1P05813 215 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 TSPAN19P0C672 248 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 TFPIP10646 304 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ACP2P11117 423 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 SCGB1A1P11684 91 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF14P17017 642 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ADRA2CP18825 462 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 TSPAN8P19075 237 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 STOMP27105 288 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 APOBEC1P41238 236 aaKnown RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 EVX1P49640 407 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF134P52741 427 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 UCP3P55916 312 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 KLF3P57682 345 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 LOXL3P58215 753 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 DNAJB13P59910 316 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 UBE2NP61088 152 aaKnown RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 H3F3AP84243 136 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 CAV1Q03135 178 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 SCN1BQ07699 218 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF616Q08AN1 781 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF763Q0D2J5 394 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 HSPB3Q12988 150 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 SKP2Q13309 424 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 RBMS2Q15434 407 aaKnown RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 BSXQ3C1V8 233 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 SCGB2B2Q4G0G5 96 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 SYT14P1Q58G82 188 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ELFN2Q5R3F8 820 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 FAM74A1Q5RGS3 127 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 NXNL2Q5VZ03 156 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 CASP12Q6UXS9 341 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 RPS27LQ71UM5 84 aaKnown RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 SSX6Q7RTT6 188 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 GRINAQ7Z429 371 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 VRK2Q86Y07 508 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 RBM45Q8IUH3 476 aaKnown RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 NRMQ8IXM6 262 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 PGAM4Q8N0Y7 254 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 FAM58AQ8N1B3 248 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 KDM8Q8N371 416 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 HSD17B11Q8NBQ5 300 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 AQP11Q8NBQ7 271 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 OR52N4Q8NGI2 321 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 OR8D4Q8NGM9 314 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 OR13D1Q8NGV5 346 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 DYNC2LI1Q8TCX1 351 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 RNASE8Q8TDE3 154 aaKnown RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 RAB1CQ92928 201 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 CREB3L1Q96BA8 519 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 LRRC58Q96CX6 371 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 MS4A4EQ96PG1 132 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ERMAPQ96PL5 475 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 PANX1Q96RD7 426 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 CNN2Q99439 309 aaKnown RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 GPA33Q99795 319 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 NIPSNAP1Q9BPW8 284 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 MRPL57Q9BQC6 102 aaKnown RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 SLC35A5Q9BS91 424 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 NAA11Q9BSU3 229 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF426Q9BUY5 554 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ELOVL1Q9BW60 279 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 EBPLQ9BY08 206 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 LAT2Q9GZY6 243 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 ACER3Q9NUN7 267 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 HDGFL3Q9Y3E1 203 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 PPIAL4AQ9Y536 164 aa4.13□□□□□ -1.75
ATXN3-247ENST00000557311 PKD1L1Q8TDX9 2849 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms