RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 BNIP1Q12981 228 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 ZNF273Q14593 569 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 ZNF146Q15072 292 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 CNN3Q15417 329 aaKnown RBP6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 UBE2V2Q15819 145 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 FBLN7Q53RD9 439 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 OR52W1Q6IF63 320 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 FDX2Q6P4F2 183 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 UTS2BQ765I0 119 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 GDPD3Q7L5L3 318 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 C16orf82Q7Z2V1 217 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 OR8H2Q8N162 312 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 YIPF7Q8N8F6 280 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 FAM110DQ8TAY7 271 aaPredicted RBP6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 RPS4Y2Q8TD47 263 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 C17orf50Q8WW18 174 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 RORBQ92753 470 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 BORCS8Q96FH0 119 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 CEP19Q96LK0 163 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 IL4I1Q96RQ9 567 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 CADM1Q9BY67 442 aaKnown RBP6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 PRSS22Q9GZN4 317 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 WNT10AQ9GZT5 417 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 ELL3Q9HB65 397 aaPredicted RBP6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 ABCB10Q9NRK6 738 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 FAM53CQ9NYF3 392 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 MTCH1Q9NZJ7 389 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 GLS2Q9UI32 602 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 AP4S1Q9Y587 144 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 LINC00312Q9Y6C7 94 aa6.3□□□□□ -1.4
PTCSC3-201ENST00000556013 TRBV2A0A0J9YWF9 115 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 A0A1W2PQL4 384 aaPredicted RBP6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 MEGF11A6BM72 1044 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 A6NDX4 124 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 FAM90A22PA8MWA6 464 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 DYNC1I1O14576 645 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 MGST3O14880 152 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 TSPAN15O95858 294 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 CYB5AP00167 134 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 ALDOBP05062 364 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 UBCP0CG48 685 aaKnown RBP6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 IGHV1-8P0DP01 117 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 CCL3L1P16619 93 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 EPHA2P29317 976 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 ATP6V1E1P36543 226 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 CCR9P51686 369 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 OR12D2P58182 307 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 PRB3Q04118 309 aaPredicted RBP6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 IL18R1Q13478 541 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 LY6EQ16553 131 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 DMRTC1Q5HYR2 192 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 SPIN3Q5JUX0 258 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 MEDAGQ5VYS4 303 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 BCDIN3DQ7Z5W3 292 aaKnown RBP6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 RTN4RL2Q86UN3 420 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 ANGPTL5Q86XS5 388 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 NDUFA11Q86Y39 141 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 KLHDC1Q8N7A1 406 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 OR4S1Q8NGB4 309 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 OR4M1Q8NGD0 313 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 WIPF2Q8TF74 440 aaPredicted RBP6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 CORO2AQ92828 525 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 CREB3L1Q96BA8 519 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 SPSB1Q96BD6 273 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 CENPNQ96H22 339 aaPredicted RBP6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 ZNF488Q96MN9 340 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 ZNF714Q96N38 554 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 PLEKHA1Q9HB21 404 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 NEK6Q9HC98 313 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 SERTAD4Q9NUC0 356 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 OR14J1Q9UGF5 321 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 NOTCH3Q9UM47 2321 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 GTF2A1LQ9UNN4 478 aa6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 UBE2J1Q9Y385 318 aaPredicted RBP6.29□□□□□ -1.4
PTCSC3-201ENST00000556013 TGP01266 2768 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 FAM230AA0A1W2PPH8 454 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 SNTNA6NMZ2 147 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 MAGEB4O15481 346 aaPredicted RBP6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 MITFO75030 526 aaPredicted RBP6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 RPP14O95059 124 aaKnown RBP6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 MT-ND2P03891 347 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 ARG1P05089 322 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 BMXP51813 675 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 EDDM3BP56851 147 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 ZNF91Q05481 1191 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 SSX2Q16385 188 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 CCBE1Q6UXH8 406 aaPredicted RBP6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 LHFPL2Q6ZUX7 228 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 SLC25A26Q70HW3 274 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 SSX6Q7RTT6 188 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 LHFPL4Q7Z7J7 247 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 SAXO1Q8IYX7 474 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 FAM58AQ8N1B3 248 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 ASCC1Q8N9N2 400 aaKnown RBP6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 WFDC9Q8NEX5 89 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 OR4F17Q8NGA8 305 aa6.28□□□□□ -1.4
PTCSC3-201ENST00000556013 ZNF596Q8TC21 504 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms