RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 OR14L1PQ8NHC6 308 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 CPT1CQ8TCG5 803 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 SGCZQ96LD1 299 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 TECTBQ96PL2 329 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 SYT3Q9BQG1 590 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 NRIP2Q9BQI9 281 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 HDHD3Q9BSH5 251 aaPredicted RBP6.09□□□□□ -1.43
TDP1-213ENST00000555880 SUCNR1Q9BXA5 334 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 SAV1Q9H4B6 383 aaPredicted RBP6.09□□□□□ -1.43
TDP1-213ENST00000555880 BCO1Q9HAY6 547 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 CRLF2Q9HC73 371 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 FAM212BQ9NTI7 297 aaPredicted RBP6.09□□□□□ -1.43
TDP1-213ENST00000555880 TMEM38BQ9NVV0 291 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 RCC2Q9P258 522 aaKnown RBP6.09□□□□□ -1.43
TDP1-213ENST00000555880 FBXL17Q9UF56 701 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 AK3Q9UIJ7 227 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 FBXO9Q9UK97 447 aaPredicted RBP6.09□□□□□ -1.43
TDP1-213ENST00000555880 NSG2Q9Y328 171 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 FAM96BQ9Y3D0 163 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 ZNF175Q9Y473 711 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 HS3ST3B1Q9Y662 390 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 USP34Q70CQ2 3546 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 IGKV1D-8A0A087WSZ0 117 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 OR6C6A6NF89 314 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 RNASEK-C17orf49H0YIS7 233 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 SYNGR3O43761 229 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 FBXO24O75426 580 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 IGHEP01854 428 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 FCGR3AP08637 254 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 H2AFB1P0C5Y9 115 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 MUC1P15941 1255 aaPredicted RBP6.09□□□□□ -1.44
TDP1-213ENST00000555880 RCC1P18754 421 aaPredicted RBP6.09□□□□□ -1.44
TDP1-213ENST00000555880 ACKR3P25106 362 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 CHATP28329 748 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 SRD5A2P31213 254 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 OPRM1P35372 400 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 LPAR6P43657 344 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 TMEM33P57088 247 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 MLF1P58340 268 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 FXYD4P59646 89 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 HERV-K104P61576 105 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 SRSF3P84103 164 aaKnown RBP6.09□□□□□ -1.44
TDP1-213ENST00000555880 MALLQ13021 153 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 HMGN3Q15651 99 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 MST1LQ2TV78 715 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 HFEQ30201 348 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 TMEM268Q5VZI3 342 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 OR2A2Q6IF42 318 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 DHRS11Q6UWP2 260 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 AAED1Q7RTV5 226 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 FAM219AQ8IW50 185 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 IQCF2Q8IXL9 164 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 OSR2Q8N2R0 312 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 CCDC71LQ8N9Z2 235 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 RTN4IP1Q8WWV3 396 aaPredicted RBP6.09□□□□□ -1.44
TDP1-213ENST00000555880 MRPL24Q96A35 216 aaKnown RBP6.09□□□□□ -1.44
TDP1-213ENST00000555880 CYYR1Q96J86 154 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 SULT4A1Q9BR01 284 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 SRXN1Q9BYN0 137 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 NAA60Q9H7X0 242 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 ZNF286AQ9HBT8 521 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 SH2D2AQ9NP31 389 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 DECR2Q9NUI1 292 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 TIMM10BQ9Y5J6 103 aa6.09□□□□□ -1.44
TDP1-213ENST00000555880 CCDC187A0A096LP49 1063 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 NDUFA2O43678 99 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 KLF7O75840 302 aaPredicted RBP6.08□□□□□ -1.44
TDP1-213ENST00000555880 TSPAN15O95858 294 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 B4GALT1P15291 398 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 PRKACAP17612 351 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 TCN2P20062 427 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 DUSP1P28562 367 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 FUT6P51993 359 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 DVL1P1P54792 670 aaPredicted RBP6.08□□□□□ -1.44
TDP1-213ENST00000555880 RRADP55042 308 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 SRPXP78539 464 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 FAM3AP98173 230 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 OR8B8Q15620 311 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 GPR157Q5UAW9 335 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 PLCXD3Q63HM9 321 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 SLC22A25Q6T423 547 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 ASCL4Q6XD76 172 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 Q6ZRG5 221 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 SKA3Q8IX90 412 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 ZNF100Q8IYN0 542 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 COMMD1Q8N668 190 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 UBAC2Q8NBM4 344 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 GALNT14Q96FL9 552 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 ALKBH3Q96Q83 286 aaPredicted RBP6.08□□□□□ -1.44
TDP1-213ENST00000555880 ADAT1Q9BUB4 502 aaKnown RBP6.08□□□□□ -1.44
TDP1-213ENST00000555880 SMIM3Q9BZL3 60 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 PROK2Q9HC23 129 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 FSCN3Q9NQT6 498 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 IL36GQ9NZH8 169 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 LUZP4Q9P127 313 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 PILRBQ9UKJ0 227 aa6.08□□□□□ -1.44
TDP1-213ENST00000555880 SDK2Q58EX2 2172 aa6.07□□□□□ -1.44
TDP1-213ENST00000555880 IGKV1-27A0A075B6S5 117 aa6.07□□□□□ -1.44
TDP1-213ENST00000555880 ZNF816-ZNF321PA0A0X1KG74 233 aa6.07□□□□□ -1.44
TDP1-213ENST00000555880 GEMIN2O14893 280 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms